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Need to upgrade Qiime2 importation format #18

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Patg13 opened this issue Oct 6, 2023 · 0 comments

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enhancement Long term dev

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Patg13 commented Oct 6, 2023

PairedEndFastqManifestPhred33V2 is the recommended format for file importation in Qiime2, it is changing the manifest file format

Ref: https://forum.qiime2.org/t/the-difference-between-phred33-and-phred33v2/16738

Multiple modification to Q2Pipe will be required to implement this change (mostly in step 1 and create_manifest_file script)

Patg13 added enhancement Long term dev labels

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