Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

convert repo into a functioning package #14

Merged
merged 38 commits into from
Sep 1, 2021
Merged

convert repo into a functioning package #14

merged 38 commits into from
Sep 1, 2021

Conversation

andybeet
Copy link
Member

@andybeet andybeet commented Sep 1, 2021

Vignettes folder

  • moved all rmd files from docs folder into vignettes folder
  • moved all static figures used in vignettes into figures folder (subfolder of vignettes)
  • added supportingFiles folder for google drive csv's (so we dont have to access google drive in pkgdown workflow)
  • changed file paths references

data-raw folder

  • Moved all R code into R folder (subfolder of data-raw). This includes simulated-data folder, diagnostics folder, code folder.
  • Created a data folder to store intermediate data files created but not delivered in package
  • Not all R scripts/functions have been moved from data-raw root
  • Some RDS files deleted and replaced with rda versions (see below)

data folder

  • created data files for
    • focalSpecies
    • fleets
    • catchAtLengthProportions`
    • allSpeciesProportions`

gis files

  • moved to data-raw/gis since these are used mainly for vignetes and some data processing. We may need to move some into inst/extdata if we want them available to the user of the data package.

- updated catch at length code and rmd
- ammend rmd to point to lazy data
- add r code to create data
- moved R and rds to data-raw/R data-raw/data
- comland_negear to hydra_comland_gear
This was linked to issues Sep 1, 2021
@andybeet andybeet merged commit 26f3443 into dev_package Sep 1, 2021
@andybeet andybeet deleted the dev_a1 branch July 29, 2022 13:58
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Move diagnostics to vignette Add all R script to data-raw
1 participant