-| PlannedProcess |
-A process that is executed according to some plan or protocol |
+DevicePart |
+A device which function is to be a part of another device that is used within... |
no |
-| MaterialEntity |
-Material entities are three-dimensional entities (entities extended in three ... |
+Dataset |
+Represents a Dataset |
no |
-| Sample |
-The material entity that is being evaluated to assay its attributes/character... |
+ChemicalAssay |
+The planned process to chemically assay a sample in order to determine some c... |
no |
-| ChemicalSubstance |
-A MaterialEntity that is composed of multiple Chemical Entities of either the... |
+ChemicalAnalysis |
+An interpretation of the data output of a ChemicalAssay |
no |
-| MinimalMetadataMixin |
-A mixin with the minimal required slots of a class in this schema |
+MaterialEntity |
+Material entities are three-dimensional entities (entities extended in three ... |
no |
-| ChemicalAssay |
-The planned process to chemically assay a sample in order to determine some c... |
+Device |
+A used within an analysis with a specific function |
no |
-| SamplePreparation |
-The process in which a sample is being generated or prepared for further anal... |
+MinimalMetadataMixin |
+A mixin with the minimal required slots of a class in this schema |
no |
-| Dataset |
-Represents a Dataset |
+Sample |
+The material entity that is being evaluated to assay its attributes/character... |
no |
-| ChemicalAnalysis |
-An interpretation of the data output of a ChemicalAssay |
+SamplePreparation |
+The process in which a sample is being generated or prepared for further anal... |
no |
-| DevicePart |
-A device which function is to be a part of another device that is used within... |
+PlannedProcess |
+A process that is executed according to some plan or protocol |
no |
-| Device |
-A used within an analysis with a specific function |
+ChemicalEntity |
+Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... |
no |
@@ -392,8 +392,8 @@ Applicable Classes
no |
-| ChemicalEntity |
-Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... |
+ChemicalSubstance |
+A MaterialEntity that is composed of multiple Chemical Entities of either the... |
no |
diff --git a/has_function/index.html b/has_function/index.html
index 1e53205..05d295b 100644
--- a/has_function/index.html
+++ b/has_function/index.html
@@ -332,13 +332,13 @@
-| PlannedProcess |
-A process that is executed according to some plan or protocol |
+DevicePart |
+A device which function is to be a part of another device that is used within... |
no |
-| MaterialEntity |
-Material entities are three-dimensional entities (entities extended in three ... |
+Dataset |
+Represents a Dataset |
no |
-| Sample |
-The material entity that is being evaluated to assay its attributes/character... |
+ChemicalAssay |
+The planned process to chemically assay a sample in order to determine some c... |
no |
-| ChemicalSubstance |
-A MaterialEntity that is composed of multiple Chemical Entities of either the... |
+ChemicalAnalysis |
+An interpretation of the data output of a ChemicalAssay |
no |
-| MinimalMetadataMixin |
-A mixin with the minimal required slots of a class in this schema |
+MaterialEntity |
+Material entities are three-dimensional entities (entities extended in three ... |
no |
-| ChemicalAssay |
-The planned process to chemically assay a sample in order to determine some c... |
+Device |
+A used within an analysis with a specific function |
no |
-| SamplePreparation |
-The process in which a sample is being generated or prepared for further anal... |
+MinimalMetadataMixin |
+A mixin with the minimal required slots of a class in this schema |
no |
-| Dataset |
-Represents a Dataset |
+Sample |
+The material entity that is being evaluated to assay its attributes/character... |
no |
-| ChemicalAnalysis |
-An interpretation of the data output of a ChemicalAssay |
+SamplePreparation |
+The process in which a sample is being generated or prepared for further anal... |
no |
-| DevicePart |
-A device which function is to be a part of another device that is used within... |
+PlannedProcess |
+A process that is executed according to some plan or protocol |
no |
-| Device |
-A used within an analysis with a specific function |
+ChemicalEntity |
+Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... |
no |
@@ -392,8 +392,8 @@ Applicable Classes
no |
-| ChemicalEntity |
-Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... |
+ChemicalSubstance |
+A MaterialEntity that is composed of multiple Chemical Entities of either the... |
no |
diff --git a/name/index.html b/name/index.html
index 3ff8885..860df29 100644
--- a/name/index.html
+++ b/name/index.html
@@ -332,58 +332,58 @@
-| PlannedProcess |
-A process that is executed according to some plan or protocol |
+DevicePart |
+A device which function is to be a part of another device that is used within... |
no |
-| MaterialEntity |
-Material entities are three-dimensional entities (entities extended in three ... |
+Dataset |
+Represents a Dataset |
no |
-| Sample |
-The material entity that is being evaluated to assay its attributes/character... |
+ChemicalAssay |
+The planned process to chemically assay a sample in order to determine some c... |
no |
-| ChemicalSubstance |
-A MaterialEntity that is composed of multiple Chemical Entities of either the... |
+ChemicalAnalysis |
+An interpretation of the data output of a ChemicalAssay |
no |
-| MinimalMetadataMixin |
-A mixin with the minimal required slots of a class in this schema |
+MaterialEntity |
+Material entities are three-dimensional entities (entities extended in three ... |
no |
-| ChemicalAssay |
-The planned process to chemically assay a sample in order to determine some c... |
+Device |
+A used within an analysis with a specific function |
no |
-| SamplePreparation |
-The process in which a sample is being generated or prepared for further anal... |
+MinimalMetadataMixin |
+A mixin with the minimal required slots of a class in this schema |
no |
-| Dataset |
-Represents a Dataset |
+Sample |
+The material entity that is being evaluated to assay its attributes/character... |
no |
-| ChemicalAnalysis |
-An interpretation of the data output of a ChemicalAssay |
+SamplePreparation |
+The process in which a sample is being generated or prepared for further anal... |
no |
-| DevicePart |
-A device which function is to be a part of another device that is used within... |
+PlannedProcess |
+A process that is executed according to some plan or protocol |
no |
-| Device |
-A used within an analysis with a specific function |
+ChemicalEntity |
+Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... |
no |
@@ -392,8 +392,8 @@ Applicable Classes
no |
-| ChemicalEntity |
-Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... |
+ChemicalSubstance |
+A MaterialEntity that is composed of multiple Chemical Entities of either the... |
no |
diff --git a/search/search_index.json b/search/search_index.json
index cf21645..542054e 100644
--- a/search/search_index.json
+++ b/search/search_index.json
@@ -1 +1 @@
-{"config":{"indexing":"full","lang":["en"],"min_search_length":3,"prebuild_index":false,"separator":"[\\s\\-]+"},"docs":[{"location":"","text":"NFDI4Chem MIChI This is the LinkML metadata schema prototype for NFDI4Chem URI: https://w3id.org/NFDI4Chem/MIChI Name: NFDI4Chem_MIChI Classes Class Description Characteristic An attribute/characteristic of an entity (which could be a material entity, information or process) ChemicalReaction A process between multiple chemical entities of a different kind. Dataset Represents a Dataset DatasetCollection A holder for Dataset objects MaterialEntity Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind Device A used within an analysis with a specific function DevicePart A device which function is to be a part of another device that is used within a chemical assay. Sample The material entity that is being evaluated to assay its attributes/characteristic. MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema. PlannedProcess A process that is executed according to some plan or protocol ChemicalAnalysis An interpretation of the data output of a ChemicalAssay ChemicalAssay The planned process to chemically assay a sample in order to determine some characteristic of it. SamplePreparation The process in which a sample is being generated or prepared for further analysis Protocol The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met Slots Slot Description based_on_assay_output The status of a ChemicalAnalysis composed_of_chemical_entity A property to provide the chemical entities of which a chemical substance is ... description A property to provide the human-readable description for a thing entries has_characteristic A property to provide a Characteristic of a Material Entity, such as a Sample... has_device A property to provide the device being used in a ChemicalAssay has_function A property to provide the specific function of a device has_input A property to provide the input of a process has_manufacturer A property to provide the vendor of a device has_model_number A property to provide the model number of a device has_output A property to provide the output of a proces has_part A property to provide the part of a device has_quantitative_value A property to provide the qualitative value of a characteristic has_sample A property to provide the sample being evaluated in a ChemicalAssay has_serial_number A property to provide the serial number of a device has_setting A property to provide a specific setting of a device has_status A property to provide the status of a ChemicalAnalysis has_type A property to provide the specific type of the class it is used on has_visual_representation A property to provide a visualization of a device, such as an image, scetch o... id A property to provide the unique identifier for a thing iupac_name A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... name A property to provide the human-readable name for a thing output_of_analysis A property to provide the chemical analysis or assay that determined the char... output_of_sampling_process A property to link a sample to its creation process produces_dataset A property to provide the dataset being produced by a ChemicalAnalysis or Che... provenance A property to provide a specific setting of a device space_group A property to provide the space group of a Chemical Substance Enumerations Enumeration Description ChemicalAnalysisStatus Types Type Description Boolean A binary (true or false) value Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification Float A real number that conforms to the xsd:float specification Integer An integer Jsonpath A string encoding a JSON Path Jsonpointer A string encoding a JSON Pointer Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model Sparqlpath A string encoding a SPARQL Property Path String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE Subsets Subset Description","title":"Index"},{"location":"#nfdi4chem-michi","text":"This is the LinkML metadata schema prototype for NFDI4Chem URI: https://w3id.org/NFDI4Chem/MIChI Name: NFDI4Chem_MIChI","title":"NFDI4Chem MIChI"},{"location":"#classes","text":"Class Description Characteristic An attribute/characteristic of an entity (which could be a material entity, information or process) ChemicalReaction A process between multiple chemical entities of a different kind. Dataset Represents a Dataset DatasetCollection A holder for Dataset objects MaterialEntity Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind Device A used within an analysis with a specific function DevicePart A device which function is to be a part of another device that is used within a chemical assay. Sample The material entity that is being evaluated to assay its attributes/characteristic. MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema. PlannedProcess A process that is executed according to some plan or protocol ChemicalAnalysis An interpretation of the data output of a ChemicalAssay ChemicalAssay The planned process to chemically assay a sample in order to determine some characteristic of it. SamplePreparation The process in which a sample is being generated or prepared for further analysis Protocol The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met","title":"Classes"},{"location":"#slots","text":"Slot Description based_on_assay_output The status of a ChemicalAnalysis composed_of_chemical_entity A property to provide the chemical entities of which a chemical substance is ... description A property to provide the human-readable description for a thing entries has_characteristic A property to provide a Characteristic of a Material Entity, such as a Sample... has_device A property to provide the device being used in a ChemicalAssay has_function A property to provide the specific function of a device has_input A property to provide the input of a process has_manufacturer A property to provide the vendor of a device has_model_number A property to provide the model number of a device has_output A property to provide the output of a proces has_part A property to provide the part of a device has_quantitative_value A property to provide the qualitative value of a characteristic has_sample A property to provide the sample being evaluated in a ChemicalAssay has_serial_number A property to provide the serial number of a device has_setting A property to provide a specific setting of a device has_status A property to provide the status of a ChemicalAnalysis has_type A property to provide the specific type of the class it is used on has_visual_representation A property to provide a visualization of a device, such as an image, scetch o... id A property to provide the unique identifier for a thing iupac_name A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... name A property to provide the human-readable name for a thing output_of_analysis A property to provide the chemical analysis or assay that determined the char... output_of_sampling_process A property to link a sample to its creation process produces_dataset A property to provide the dataset being produced by a ChemicalAnalysis or Che... provenance A property to provide a specific setting of a device space_group A property to provide the space group of a Chemical Substance","title":"Slots"},{"location":"#enumerations","text":"Enumeration Description ChemicalAnalysisStatus","title":"Enumerations"},{"location":"#types","text":"Type Description Boolean A binary (true or false) value Curie a compact URI Date a date (year, month and day) in an idealized calendar DateOrDatetime Either a date or a datetime Datetime The combination of a date and time Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci... Double A real number that conforms to the xsd:double specification Float A real number that conforms to the xsd:float specification Integer An integer Jsonpath A string encoding a JSON Path Jsonpointer A string encoding a JSON Pointer Ncname Prefix part of CURIE Nodeidentifier A URI, CURIE or BNODE that represents a node in a model Objectidentifier A URI or CURIE that represents an object in the model Sparqlpath A string encoding a SPARQL Property Path String A character string Time A time object represents a (local) time of day, independent of any particular... Uri a complete URI Uriorcurie a URI or a CURIE","title":"Types"},{"location":"#subsets","text":"Subset Description","title":"Subsets"},{"location":"Boolean/","text":"Type: Boolean A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Boolean"},{"location":"Boolean/#type-boolean","text":"A binary (true or false) value URI: xsd:boolean base : Bool uri : xsd:boolean repr : bool","title":"Type: Boolean"},{"location":"Boolean/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Boolean/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Characteristic/","text":"Class: Characteristic An attribute/characteristic of an entity (which could be a material entity, information or process) URI: BFO:0000020 classDiagram class Characteristic click Characteristic href \"../Characteristic\" Characteristic : has_quantitative_value Characteristic : output_of_analysis Slots Name Cardinality and Range Description Inheritance has_quantitative_value 0..1 String A property to provide the qualitative value of a characteristic direct output_of_analysis 0..1 String A property to provide the chemical analysis or assay that determined the char... direct Usages used by used in type used Characteristic has_quantitative_value domain Characteristic Characteristic output_of_analysis domain Characteristic Sample has_characteristic range Characteristic Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self BFO:0000020 native michi:Characteristic LinkML Source Direct name: Characteristic description: An attribute/characteristic of an entity (which could be a material entity, information or process) from_schema: https://w3id.org/NFDI4Chem/MIChI slots: - has_quantitative_value - output_of_analysis class_uri: BFO:0000020 Induced name: Characteristic description: An attribute/characteristic of an entity (which could be a material entity, information or process) from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: has_quantitative_value: name: has_quantitative_value description: A property to provide the qualitative value of a characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: has_quantitative_value owner: Characteristic domain_of: - Characteristic range: string output_of_analysis: name: output_of_analysis description: A property to provide the chemical analysis or assay that determined the characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: output_of_analysis owner: Characteristic domain_of: - Characteristic range: string class_uri: BFO:0000020","title":"Class: Characteristic"},{"location":"Characteristic/#class-characteristic","text":"An attribute/characteristic of an entity (which could be a material entity, information or process) URI: BFO:0000020 classDiagram class Characteristic click Characteristic href \"../Characteristic\" Characteristic : has_quantitative_value Characteristic : output_of_analysis","title":"Class: Characteristic"},{"location":"Characteristic/#slots","text":"Name Cardinality and Range Description Inheritance has_quantitative_value 0..1 String A property to provide the qualitative value of a characteristic direct output_of_analysis 0..1 String A property to provide the chemical analysis or assay that determined the char... direct","title":"Slots"},{"location":"Characteristic/#usages","text":"used by used in type used Characteristic has_quantitative_value domain Characteristic Characteristic output_of_analysis domain Characteristic Sample has_characteristic range Characteristic","title":"Usages"},{"location":"Characteristic/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Characteristic/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Characteristic/#mappings","text":"Mapping Type Mapped Value self BFO:0000020 native michi:Characteristic","title":"Mappings"},{"location":"Characteristic/#linkml-source","text":"","title":"LinkML Source"},{"location":"Characteristic/#direct","text":"name: Characteristic description: An attribute/characteristic of an entity (which could be a material entity, information or process) from_schema: https://w3id.org/NFDI4Chem/MIChI slots: - has_quantitative_value - output_of_analysis class_uri: BFO:0000020","title":"Direct"},{"location":"Characteristic/#induced","text":"name: Characteristic description: An attribute/characteristic of an entity (which could be a material entity, information or process) from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: has_quantitative_value: name: has_quantitative_value description: A property to provide the qualitative value of a characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: has_quantitative_value owner: Characteristic domain_of: - Characteristic range: string output_of_analysis: name: output_of_analysis description: A property to provide the chemical analysis or assay that determined the characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: output_of_analysis owner: Characteristic domain_of: - Characteristic range: string class_uri: BFO:0000020","title":"Induced"},{"location":"ChemicalAnalysis/","text":"Class: ChemicalAnalysis An interpretation of the data output of a ChemicalAssay URI: michi:ChemicalAnalysis classDiagram class ChemicalAnalysis click ChemicalAnalysis href \"../ChemicalAnalysis\" PlannedProcess <|-- ChemicalAnalysis click PlannedProcess href \"../PlannedProcess\" ChemicalAnalysis : based_on_assay_output ChemicalAnalysis : description ChemicalAnalysis : has_input ChemicalAnalysis : has_output ChemicalAnalysis : has_status ChemicalAnalysis --> \"0..1\" ChemicalAnalysisStatus : has_status click ChemicalAnalysisStatus href \"../ChemicalAnalysisStatus\" ChemicalAnalysis : id ChemicalAnalysis : name Inheritance PlannedProcess [ MinimalMetadataMixin ] ChemicalAnalysis Slots Name Cardinality and Range Description Inheritance has_status 0..1 ChemicalAnalysisStatus A property to provide the status of a ChemicalAnalysis direct based_on_assay_output 0..1 String The status of a ChemicalAnalysis direct has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used ChemicalAnalysis has_status domain ChemicalAnalysis ChemicalAnalysis based_on_assay_output domain ChemicalAnalysis Comments Examples: an assignment of chemical structures to certain peaks in a spectrum TODOs think about or the other possible slots for different kinds of chemical analyses Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:ChemicalAnalysis native michi:ChemicalAnalysis LinkML Source Direct name: ChemicalAnalysis description: An interpretation of the data output of a ChemicalAssay todos: - think about or the other possible slots for different kinds of chemical analyses comments: - 'Examples: an assignment of chemical structures to certain peaks in a spectrum' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess slots: - has_status - based_on_assay_output Induced name: ChemicalAnalysis description: An interpretation of the data output of a ChemicalAssay todos: - think about or the other possible slots for different kinds of chemical analyses comments: - 'Examples: an assignment of chemical structures to certain peaks in a spectrum' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_status: name: has_status description: A property to provide the status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: has_status owner: ChemicalAnalysis domain_of: - ChemicalAnalysis range: ChemicalAnalysisStatus based_on_assay_output: name: based_on_assay_output description: The status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: based_on_assay_output owner: ChemicalAnalysis domain_of: - ChemicalAnalysis range: string has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: ChemicalAnalysis domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: ChemicalAnalysis domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: string","title":"Class: ChemicalAnalysis"},{"location":"ChemicalAnalysis/#class-chemicalanalysis","text":"An interpretation of the data output of a ChemicalAssay URI: michi:ChemicalAnalysis classDiagram class ChemicalAnalysis click ChemicalAnalysis href \"../ChemicalAnalysis\" PlannedProcess <|-- ChemicalAnalysis click PlannedProcess href \"../PlannedProcess\" ChemicalAnalysis : based_on_assay_output ChemicalAnalysis : description ChemicalAnalysis : has_input ChemicalAnalysis : has_output ChemicalAnalysis : has_status ChemicalAnalysis --> \"0..1\" ChemicalAnalysisStatus : has_status click ChemicalAnalysisStatus href \"../ChemicalAnalysisStatus\" ChemicalAnalysis : id ChemicalAnalysis : name","title":"Class: ChemicalAnalysis"},{"location":"ChemicalAnalysis/#inheritance","text":"PlannedProcess [ MinimalMetadataMixin ] ChemicalAnalysis","title":"Inheritance"},{"location":"ChemicalAnalysis/#slots","text":"Name Cardinality and Range Description Inheritance has_status 0..1 ChemicalAnalysisStatus A property to provide the status of a ChemicalAnalysis direct based_on_assay_output 0..1 String The status of a ChemicalAnalysis direct has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalAnalysis/#usages","text":"used by used in type used ChemicalAnalysis has_status domain ChemicalAnalysis ChemicalAnalysis based_on_assay_output domain ChemicalAnalysis","title":"Usages"},{"location":"ChemicalAnalysis/#comments","text":"Examples: an assignment of chemical structures to certain peaks in a spectrum","title":"Comments"},{"location":"ChemicalAnalysis/#todos","text":"think about or the other possible slots for different kinds of chemical analyses","title":"TODOs"},{"location":"ChemicalAnalysis/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalAnalysis/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalAnalysis/#mappings","text":"Mapping Type Mapped Value self michi:ChemicalAnalysis native michi:ChemicalAnalysis","title":"Mappings"},{"location":"ChemicalAnalysis/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalAnalysis/#direct","text":"name: ChemicalAnalysis description: An interpretation of the data output of a ChemicalAssay todos: - think about or the other possible slots for different kinds of chemical analyses comments: - 'Examples: an assignment of chemical structures to certain peaks in a spectrum' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess slots: - has_status - based_on_assay_output","title":"Direct"},{"location":"ChemicalAnalysis/#induced","text":"name: ChemicalAnalysis description: An interpretation of the data output of a ChemicalAssay todos: - think about or the other possible slots for different kinds of chemical analyses comments: - 'Examples: an assignment of chemical structures to certain peaks in a spectrum' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_status: name: has_status description: A property to provide the status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: has_status owner: ChemicalAnalysis domain_of: - ChemicalAnalysis range: ChemicalAnalysisStatus based_on_assay_output: name: based_on_assay_output description: The status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: based_on_assay_output owner: ChemicalAnalysis domain_of: - ChemicalAnalysis range: string has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: ChemicalAnalysis domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: ChemicalAnalysis domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"ChemicalAnalysisStatus/","text":"Enum: ChemicalAnalysisStatus URI: ChemicalAnalysisStatus Permissible Values Value Meaning Description PLANNED None the chemical analysis is planned but has not been executed IN_PROGRESS None the chemical analysis is in the making DONE None the chemical analysis is in the done CONFIRMED None the chemical analysis has been confirmed by a peer UNCONFIRMED None the chemical analysis has not yet been confirmed by a peer Slots Name Description has_status A property to provide the status of a ChemicalAnalysis Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: ChemicalAnalysisStatus from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 permissible_values: PLANNED: text: PLANNED description: the chemical analysis is planned but has not been executed IN_PROGRESS: text: IN_PROGRESS description: the chemical analysis is in the making DONE: text: DONE description: the chemical analysis is in the done CONFIRMED: text: CONFIRMED description: the chemical analysis has been confirmed by a peer UNCONFIRMED: text: UNCONFIRMED description: the chemical analysis has not yet been confirmed by a peer","title":"Enum: ChemicalAnalysisStatus"},{"location":"ChemicalAnalysisStatus/#enum-chemicalanalysisstatus","text":"URI: ChemicalAnalysisStatus","title":"Enum: ChemicalAnalysisStatus"},{"location":"ChemicalAnalysisStatus/#permissible-values","text":"Value Meaning Description PLANNED None the chemical analysis is planned but has not been executed IN_PROGRESS None the chemical analysis is in the making DONE None the chemical analysis is in the done CONFIRMED None the chemical analysis has been confirmed by a peer UNCONFIRMED None the chemical analysis has not yet been confirmed by a peer","title":"Permissible Values"},{"location":"ChemicalAnalysisStatus/#slots","text":"Name Description has_status A property to provide the status of a ChemicalAnalysis","title":"Slots"},{"location":"ChemicalAnalysisStatus/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalAnalysisStatus/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalAnalysisStatus/#linkml-source","text":"name: ChemicalAnalysisStatus from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 permissible_values: PLANNED: text: PLANNED description: the chemical analysis is planned but has not been executed IN_PROGRESS: text: IN_PROGRESS description: the chemical analysis is in the making DONE: text: DONE description: the chemical analysis is in the done CONFIRMED: text: CONFIRMED description: the chemical analysis has been confirmed by a peer UNCONFIRMED: text: UNCONFIRMED description: the chemical analysis has not yet been confirmed by a peer","title":"LinkML Source"},{"location":"ChemicalAssay/","text":"Class: ChemicalAssay The planned process to chemically assay a sample in order to determine some characteristic of it. URI: OBI:0000070 classDiagram class ChemicalAssay click ChemicalAssay href \"../ChemicalAssay\" PlannedProcess <|-- ChemicalAssay click PlannedProcess href \"../PlannedProcess\" ChemicalAssay : description ChemicalAssay : has_device ChemicalAssay : has_input ChemicalAssay : has_output ChemicalAssay : has_sample ChemicalAssay : has_type ChemicalAssay : id ChemicalAssay : name ChemicalAssay : produces_dataset Inheritance PlannedProcess [ MinimalMetadataMixin ] ChemicalAssay Slots Name Cardinality and Range Description Inheritance has_sample 0..1 String A property to provide the sample being evaluated in a ChemicalAssay direct has_device 0..1 String A property to provide the device being used in a ChemicalAssay direct produces_dataset 0..1 String A property to provide the dataset being produced by a ChemicalAnalysis or Che... direct has_type 0..1 String A property to provide the specific type of the class it is used on direct has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used ChemicalAssay has_sample domain ChemicalAssay ChemicalAssay has_device domain ChemicalAssay ChemicalAssay produces_dataset domain ChemicalAssay Comments Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self OBI:0000070 native michi:ChemicalAssay LinkML Source Direct name: ChemicalAssay description: The planned process to chemically assay a sample in order to determine some characteristic of it. comments: - 'Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess slots: - has_sample - has_device - produces_dataset - has_type class_uri: OBI:0000070 Induced name: ChemicalAssay description: The planned process to chemically assay a sample in order to determine some characteristic of it. comments: - 'Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_sample: name: has_sample description: A property to provide the sample being evaluated in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_sample owner: ChemicalAssay domain_of: - ChemicalAssay range: string has_device: name: has_device description: A property to provide the device being used in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_device owner: ChemicalAssay domain_of: - ChemicalAssay range: string produces_dataset: name: produces_dataset description: A property to provide the dataset being produced by a ChemicalAnalysis or ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_output domain: ChemicalAssay alias: produces_dataset owner: ChemicalAssay domain_of: - ChemicalAssay range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: ChemicalAssay domain_of: - Device - ChemicalAssay range: string has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: ChemicalAssay domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: ChemicalAssay domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: string class_uri: OBI:0000070","title":"Class: ChemicalAssay"},{"location":"ChemicalAssay/#class-chemicalassay","text":"The planned process to chemically assay a sample in order to determine some characteristic of it. URI: OBI:0000070 classDiagram class ChemicalAssay click ChemicalAssay href \"../ChemicalAssay\" PlannedProcess <|-- ChemicalAssay click PlannedProcess href \"../PlannedProcess\" ChemicalAssay : description ChemicalAssay : has_device ChemicalAssay : has_input ChemicalAssay : has_output ChemicalAssay : has_sample ChemicalAssay : has_type ChemicalAssay : id ChemicalAssay : name ChemicalAssay : produces_dataset","title":"Class: ChemicalAssay"},{"location":"ChemicalAssay/#inheritance","text":"PlannedProcess [ MinimalMetadataMixin ] ChemicalAssay","title":"Inheritance"},{"location":"ChemicalAssay/#slots","text":"Name Cardinality and Range Description Inheritance has_sample 0..1 String A property to provide the sample being evaluated in a ChemicalAssay direct has_device 0..1 String A property to provide the device being used in a ChemicalAssay direct produces_dataset 0..1 String A property to provide the dataset being produced by a ChemicalAnalysis or Che... direct has_type 0..1 String A property to provide the specific type of the class it is used on direct has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalAssay/#usages","text":"used by used in type used ChemicalAssay has_sample domain ChemicalAssay ChemicalAssay has_device domain ChemicalAssay ChemicalAssay produces_dataset domain ChemicalAssay","title":"Usages"},{"location":"ChemicalAssay/#comments","text":"Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample","title":"Comments"},{"location":"ChemicalAssay/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalAssay/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalAssay/#mappings","text":"Mapping Type Mapped Value self OBI:0000070 native michi:ChemicalAssay","title":"Mappings"},{"location":"ChemicalAssay/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalAssay/#direct","text":"name: ChemicalAssay description: The planned process to chemically assay a sample in order to determine some characteristic of it. comments: - 'Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess slots: - has_sample - has_device - produces_dataset - has_type class_uri: OBI:0000070","title":"Direct"},{"location":"ChemicalAssay/#induced","text":"name: ChemicalAssay description: The planned process to chemically assay a sample in order to determine some characteristic of it. comments: - 'Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_sample: name: has_sample description: A property to provide the sample being evaluated in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_sample owner: ChemicalAssay domain_of: - ChemicalAssay range: string has_device: name: has_device description: A property to provide the device being used in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_device owner: ChemicalAssay domain_of: - ChemicalAssay range: string produces_dataset: name: produces_dataset description: A property to provide the dataset being produced by a ChemicalAnalysis or ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_output domain: ChemicalAssay alias: produces_dataset owner: ChemicalAssay domain_of: - ChemicalAssay range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: ChemicalAssay domain_of: - Device - ChemicalAssay range: string has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: ChemicalAssay domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: ChemicalAssay domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: string class_uri: OBI:0000070","title":"Induced"},{"location":"ChemicalEntity/","text":"Class: ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. URI: CHEBI:23367 classDiagram class ChemicalEntity click ChemicalEntity href \"../ChemicalEntity\" MaterialEntity <|-- ChemicalEntity click MaterialEntity href \"../MaterialEntity\" ChemicalEntity : description ChemicalEntity : id ChemicalEntity : iupac_name ChemicalEntity : name Inheritance MaterialEntity [ MinimalMetadataMixin ] ChemicalEntity Slots Name Cardinality and Range Description Inheritance iupac_name 0..1 String A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Comments This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self CHEBI:23367 native michi:ChemicalEntity LinkML Source Direct name: ChemicalEntity description: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. comments: - This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance - There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - iupac_name class_uri: CHEBI:23367 Induced name: ChemicalEntity description: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. comments: - This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance - There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: iupac_name: name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name owner: ChemicalEntity domain_of: - ChemicalEntity - ChemicalSubstance range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: string class_uri: CHEBI:23367","title":"Class: ChemicalEntity"},{"location":"ChemicalEntity/#class-chemicalentity","text":"Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. URI: CHEBI:23367 classDiagram class ChemicalEntity click ChemicalEntity href \"../ChemicalEntity\" MaterialEntity <|-- ChemicalEntity click MaterialEntity href \"../MaterialEntity\" ChemicalEntity : description ChemicalEntity : id ChemicalEntity : iupac_name ChemicalEntity : name","title":"Class: ChemicalEntity"},{"location":"ChemicalEntity/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] ChemicalEntity","title":"Inheritance"},{"location":"ChemicalEntity/#slots","text":"Name Cardinality and Range Description Inheritance iupac_name 0..1 String A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalEntity/#comments","text":"This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list?","title":"Comments"},{"location":"ChemicalEntity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalEntity/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalEntity/#mappings","text":"Mapping Type Mapped Value self CHEBI:23367 native michi:ChemicalEntity","title":"Mappings"},{"location":"ChemicalEntity/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalEntity/#direct","text":"name: ChemicalEntity description: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. comments: - This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance - There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - iupac_name class_uri: CHEBI:23367","title":"Direct"},{"location":"ChemicalEntity/#induced","text":"name: ChemicalEntity description: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. comments: - This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance - There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: iupac_name: name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name owner: ChemicalEntity domain_of: - ChemicalEntity - ChemicalSubstance range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: string class_uri: CHEBI:23367","title":"Induced"},{"location":"ChemicalReaction/","text":"Class: ChemicalReaction A process between multiple chemical entities of a different kind. URI: michi:ChemicalReaction classDiagram class ChemicalReaction click ChemicalReaction href \"../ChemicalReaction\" MinimalMetadataMixin <|-- ChemicalReaction click MinimalMetadataMixin href \"../MinimalMetadataMixin\" ChemicalReaction : description ChemicalReaction : id ChemicalReaction : name Inheritance ChemicalReaction [ MinimalMetadataMixin ] Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin TODOs improve description Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:ChemicalReaction native michi:ChemicalReaction LinkML Source Direct name: ChemicalReaction description: A process between multiple chemical entities of a different kind. todos: - improve description from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin Induced name: ChemicalReaction description: A process between multiple chemical entities of a different kind. todos: - improve description from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: string","title":"Class: ChemicalReaction"},{"location":"ChemicalReaction/#class-chemicalreaction","text":"A process between multiple chemical entities of a different kind. URI: michi:ChemicalReaction classDiagram class ChemicalReaction click ChemicalReaction href \"../ChemicalReaction\" MinimalMetadataMixin <|-- ChemicalReaction click MinimalMetadataMixin href \"../MinimalMetadataMixin\" ChemicalReaction : description ChemicalReaction : id ChemicalReaction : name","title":"Class: ChemicalReaction"},{"location":"ChemicalReaction/#inheritance","text":"ChemicalReaction [ MinimalMetadataMixin ]","title":"Inheritance"},{"location":"ChemicalReaction/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalReaction/#todos","text":"improve description","title":"TODOs"},{"location":"ChemicalReaction/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalReaction/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalReaction/#mappings","text":"Mapping Type Mapped Value self michi:ChemicalReaction native michi:ChemicalReaction","title":"Mappings"},{"location":"ChemicalReaction/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalReaction/#direct","text":"name: ChemicalReaction description: A process between multiple chemical entities of a different kind. todos: - improve description from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin","title":"Direct"},{"location":"ChemicalReaction/#induced","text":"name: ChemicalReaction description: A process between multiple chemical entities of a different kind. todos: - improve description from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"ChemicalSubstance/","text":"Class: ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind URI: CHEBI:59999 classDiagram class ChemicalSubstance click ChemicalSubstance href \"../ChemicalSubstance\" MaterialEntity <|-- ChemicalSubstance click MaterialEntity href \"../MaterialEntity\" ChemicalSubstance : composed_of_chemical_entity ChemicalSubstance : description ChemicalSubstance : id ChemicalSubstance : iupac_name ChemicalSubstance : name ChemicalSubstance : provenance ChemicalSubstance : space_group Inheritance MaterialEntity [ MinimalMetadataMixin ] ChemicalSubstance Slots Name Cardinality and Range Description Inheritance provenance 0..1 String A property to provide a specific setting of a device direct composed_of_chemical_entity * String A property to provide the chemical entities of which a chemical substance is ... direct space_group 0..1 String A property to provide the space group of a Chemical Substance direct iupac_name 0..1 String A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used ChemicalSubstance provenance domain ChemicalSubstance ChemicalSubstance composed_of_chemical_entity domain ChemicalSubstance ChemicalSubstance space_group domain ChemicalSubstance Comments CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types. Examples: a polymer, a mixture of ethanol and methanol, O2 Ti TODOs we need to describe ratios of chemical entities in a chemical substance Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self CHEBI:59999 native michi:ChemicalSubstance LinkML Source Direct name: ChemicalSubstance description: A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind todos: - we need to describe ratios of chemical entities in a chemical substance comments: - 'CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.' - 'Examples: a polymer, a mixture of ethanol and methanol, O2 Ti' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - provenance - composed_of_chemical_entity - space_group - iupac_name class_uri: CHEBI:59999 Induced name: ChemicalSubstance description: A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind todos: - we need to describe ratios of chemical entities in a chemical substance comments: - 'CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.' - 'Examples: a polymer, a mixture of ethanol and methanol, O2 Ti' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: provenance: name: provenance description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: provenance owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string composed_of_chemical_entity: name: composed_of_chemical_entity description: A property to provide the chemical entities of which a chemical substance is composed of. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance multivalued: true alias: composed_of_chemical_entity owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string space_group: name: space_group description: A property to provide the space group of a Chemical Substance. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: space_group owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string iupac_name: name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name owner: ChemicalSubstance domain_of: - ChemicalEntity - ChemicalSubstance range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: string class_uri: CHEBI:59999","title":"Class: ChemicalSubstance"},{"location":"ChemicalSubstance/#class-chemicalsubstance","text":"A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind URI: CHEBI:59999 classDiagram class ChemicalSubstance click ChemicalSubstance href \"../ChemicalSubstance\" MaterialEntity <|-- ChemicalSubstance click MaterialEntity href \"../MaterialEntity\" ChemicalSubstance : composed_of_chemical_entity ChemicalSubstance : description ChemicalSubstance : id ChemicalSubstance : iupac_name ChemicalSubstance : name ChemicalSubstance : provenance ChemicalSubstance : space_group","title":"Class: ChemicalSubstance"},{"location":"ChemicalSubstance/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] ChemicalSubstance","title":"Inheritance"},{"location":"ChemicalSubstance/#slots","text":"Name Cardinality and Range Description Inheritance provenance 0..1 String A property to provide a specific setting of a device direct composed_of_chemical_entity * String A property to provide the chemical entities of which a chemical substance is ... direct space_group 0..1 String A property to provide the space group of a Chemical Substance direct iupac_name 0..1 String A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalSubstance/#usages","text":"used by used in type used ChemicalSubstance provenance domain ChemicalSubstance ChemicalSubstance composed_of_chemical_entity domain ChemicalSubstance ChemicalSubstance space_group domain ChemicalSubstance","title":"Usages"},{"location":"ChemicalSubstance/#comments","text":"CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types. Examples: a polymer, a mixture of ethanol and methanol, O2 Ti","title":"Comments"},{"location":"ChemicalSubstance/#todos","text":"we need to describe ratios of chemical entities in a chemical substance","title":"TODOs"},{"location":"ChemicalSubstance/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalSubstance/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalSubstance/#mappings","text":"Mapping Type Mapped Value self CHEBI:59999 native michi:ChemicalSubstance","title":"Mappings"},{"location":"ChemicalSubstance/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalSubstance/#direct","text":"name: ChemicalSubstance description: A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind todos: - we need to describe ratios of chemical entities in a chemical substance comments: - 'CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.' - 'Examples: a polymer, a mixture of ethanol and methanol, O2 Ti' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - provenance - composed_of_chemical_entity - space_group - iupac_name class_uri: CHEBI:59999","title":"Direct"},{"location":"ChemicalSubstance/#induced","text":"name: ChemicalSubstance description: A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind todos: - we need to describe ratios of chemical entities in a chemical substance comments: - 'CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.' - 'Examples: a polymer, a mixture of ethanol and methanol, O2 Ti' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: provenance: name: provenance description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: provenance owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string composed_of_chemical_entity: name: composed_of_chemical_entity description: A property to provide the chemical entities of which a chemical substance is composed of. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance multivalued: true alias: composed_of_chemical_entity owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string space_group: name: space_group description: A property to provide the space group of a Chemical Substance. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: space_group owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string iupac_name: name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name owner: ChemicalSubstance domain_of: - ChemicalEntity - ChemicalSubstance range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: string class_uri: CHEBI:59999","title":"Induced"},{"location":"Curie/","text":"Type: Curie a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str Comments in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Curie"},{"location":"Curie/#type-curie","text":"a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str","title":"Type: Curie"},{"location":"Curie/#comments","text":"in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation","title":"Comments"},{"location":"Curie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Curie/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Dataset/","text":"Class: Dataset Represents a Dataset URI: michi:Dataset classDiagram class Dataset click Dataset href \"../Dataset\" MinimalMetadataMixin <|-- Dataset click MinimalMetadataMixin href \"../MinimalMetadataMixin\" Dataset : description Dataset : id Dataset : name Inheritance Dataset [ MinimalMetadataMixin ] Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used DatasetCollection entries range Dataset Comments PS: wasn't discussed in the Halle Metadatathon Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:Dataset native michi:Dataset LinkML Source Direct name: Dataset description: Represents a Dataset comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin Induced name: Dataset description: Represents a Dataset comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Dataset domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Dataset domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Dataset domain_of: - MinimalMetadataMixin range: string","title":"Class: Dataset"},{"location":"Dataset/#class-dataset","text":"Represents a Dataset URI: michi:Dataset classDiagram class Dataset click Dataset href \"../Dataset\" MinimalMetadataMixin <|-- Dataset click MinimalMetadataMixin href \"../MinimalMetadataMixin\" Dataset : description Dataset : id Dataset : name","title":"Class: Dataset"},{"location":"Dataset/#inheritance","text":"Dataset [ MinimalMetadataMixin ]","title":"Inheritance"},{"location":"Dataset/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"Dataset/#usages","text":"used by used in type used DatasetCollection entries range Dataset","title":"Usages"},{"location":"Dataset/#comments","text":"PS: wasn't discussed in the Halle Metadatathon","title":"Comments"},{"location":"Dataset/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Dataset/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Dataset/#mappings","text":"Mapping Type Mapped Value self michi:Dataset native michi:Dataset","title":"Mappings"},{"location":"Dataset/#linkml-source","text":"","title":"LinkML Source"},{"location":"Dataset/#direct","text":"name: Dataset description: Represents a Dataset comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin","title":"Direct"},{"location":"Dataset/#induced","text":"name: Dataset description: Represents a Dataset comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Dataset domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Dataset domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Dataset domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"DatasetCollection/","text":"Class: DatasetCollection A holder for Dataset objects URI: michi:DatasetCollection classDiagram class DatasetCollection click DatasetCollection href \"../DatasetCollection\" DatasetCollection : entries DatasetCollection --> \"*\" Dataset : entries click Dataset href \"../Dataset\" Slots Name Cardinality and Range Description Inheritance entries * Dataset direct Comments PS: wasn't discussed in the Halle Metadatathon Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:DatasetCollection native michi:DatasetCollection LinkML Source Direct name: DatasetCollection description: A holder for Dataset objects comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: entries: name: entries from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 multivalued: true domain_of: - DatasetCollection range: Dataset inlined: true tree_root: true Induced name: DatasetCollection description: A holder for Dataset objects comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: entries: name: entries from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 multivalued: true alias: entries owner: DatasetCollection domain_of: - DatasetCollection range: Dataset inlined: true tree_root: true","title":"Class: DatasetCollection"},{"location":"DatasetCollection/#class-datasetcollection","text":"A holder for Dataset objects URI: michi:DatasetCollection classDiagram class DatasetCollection click DatasetCollection href \"../DatasetCollection\" DatasetCollection : entries DatasetCollection --> \"*\" Dataset : entries click Dataset href \"../Dataset\"","title":"Class: DatasetCollection"},{"location":"DatasetCollection/#slots","text":"Name Cardinality and Range Description Inheritance entries * Dataset direct","title":"Slots"},{"location":"DatasetCollection/#comments","text":"PS: wasn't discussed in the Halle Metadatathon","title":"Comments"},{"location":"DatasetCollection/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DatasetCollection/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"DatasetCollection/#mappings","text":"Mapping Type Mapped Value self michi:DatasetCollection native michi:DatasetCollection","title":"Mappings"},{"location":"DatasetCollection/#linkml-source","text":"","title":"LinkML Source"},{"location":"DatasetCollection/#direct","text":"name: DatasetCollection description: A holder for Dataset objects comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: entries: name: entries from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 multivalued: true domain_of: - DatasetCollection range: Dataset inlined: true tree_root: true","title":"Direct"},{"location":"DatasetCollection/#induced","text":"name: DatasetCollection description: A holder for Dataset objects comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: entries: name: entries from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 multivalued: true alias: entries owner: DatasetCollection domain_of: - DatasetCollection range: Dataset inlined: true tree_root: true","title":"Induced"},{"location":"Date/","text":"Type: Date a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str","title":"Type: Date"},{"location":"Date/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Date/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"DateOrDatetime/","text":"Type: DateOrDatetime Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#type-dateordatetime","text":"Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DateOrDatetime/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Datetime/","text":"Type: Datetime The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str","title":"Type: Datetime"},{"location":"Datetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Datetime/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Decimal/","text":"Type: Decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal","title":"Type: Decimal"},{"location":"Decimal/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Decimal/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Device/","text":"Class: Device A used within an analysis with a specific function URI: michi:Device classDiagram class Device click Device href \"../Device\" MaterialEntity <|-- Device click MaterialEntity href \"../MaterialEntity\" Device <|-- DevicePart click DevicePart href \"../DevicePart\" Device : description Device : has_function Device : has_manufacturer Device : has_model_number Device : has_part Device : has_serial_number Device : has_setting Device : has_type Device : has_visual_representation Device : id Device : name Inheritance MaterialEntity [ MinimalMetadataMixin ] Device DevicePart Slots Name Cardinality and Range Description Inheritance has_part 0..1 String A property to provide the part of a device direct has_manufacturer 0..1 String A property to provide the vendor of a device direct has_serial_number 0..1 String A property to provide the serial number of a device direct has_model_number 0..1 String A property to provide the model number of a device direct has_function 0..1 String A property to provide the specific function of a device direct has_setting 0..1 String A property to provide a specific setting of a device direct has_visual_representation 0..1 String A property to provide a visualization of a device, such as an image, scetch o... direct has_type 0..1 String A property to provide the specific type of the class it is used on direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:Device native michi:Device LinkML Source Direct name: Device description: A used within an analysis with a specific function from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - has_part - has_manufacturer - has_serial_number - has_model_number - has_function - has_setting - has_visual_representation - has_type Induced name: Device description: A used within an analysis with a specific function from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: has_part: name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part owner: Device domain_of: - Device range: string has_manufacturer: name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer owner: Device domain_of: - Device range: string has_serial_number: name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number owner: Device domain_of: - Device range: string has_model_number: name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number owner: Device domain_of: - Device range: string has_function: name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function owner: Device domain_of: - Device range: string has_setting: name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting owner: Device domain_of: - Device range: string has_visual_representation: name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation owner: Device domain_of: - Device range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: Device domain_of: - Device - ChemicalAssay range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Device domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Device domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Device domain_of: - MinimalMetadataMixin range: string","title":"Class: Device"},{"location":"Device/#class-device","text":"A used within an analysis with a specific function URI: michi:Device classDiagram class Device click Device href \"../Device\" MaterialEntity <|-- Device click MaterialEntity href \"../MaterialEntity\" Device <|-- DevicePart click DevicePart href \"../DevicePart\" Device : description Device : has_function Device : has_manufacturer Device : has_model_number Device : has_part Device : has_serial_number Device : has_setting Device : has_type Device : has_visual_representation Device : id Device : name","title":"Class: Device"},{"location":"Device/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] Device DevicePart","title":"Inheritance"},{"location":"Device/#slots","text":"Name Cardinality and Range Description Inheritance has_part 0..1 String A property to provide the part of a device direct has_manufacturer 0..1 String A property to provide the vendor of a device direct has_serial_number 0..1 String A property to provide the serial number of a device direct has_model_number 0..1 String A property to provide the model number of a device direct has_function 0..1 String A property to provide the specific function of a device direct has_setting 0..1 String A property to provide a specific setting of a device direct has_visual_representation 0..1 String A property to provide a visualization of a device, such as an image, scetch o... direct has_type 0..1 String A property to provide the specific type of the class it is used on direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"Device/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Device/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Device/#mappings","text":"Mapping Type Mapped Value self michi:Device native michi:Device","title":"Mappings"},{"location":"Device/#linkml-source","text":"","title":"LinkML Source"},{"location":"Device/#direct","text":"name: Device description: A used within an analysis with a specific function from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - has_part - has_manufacturer - has_serial_number - has_model_number - has_function - has_setting - has_visual_representation - has_type","title":"Direct"},{"location":"Device/#induced","text":"name: Device description: A used within an analysis with a specific function from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: has_part: name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part owner: Device domain_of: - Device range: string has_manufacturer: name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer owner: Device domain_of: - Device range: string has_serial_number: name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number owner: Device domain_of: - Device range: string has_model_number: name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number owner: Device domain_of: - Device range: string has_function: name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function owner: Device domain_of: - Device range: string has_setting: name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting owner: Device domain_of: - Device range: string has_visual_representation: name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation owner: Device domain_of: - Device range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: Device domain_of: - Device - ChemicalAssay range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Device domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Device domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Device domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"DevicePart/","text":"Class: DevicePart A device which function is to be a part of another device that is used within a chemical assay. URI: michi:DevicePart classDiagram class DevicePart click DevicePart href \"../DevicePart\" Device <|-- DevicePart click Device href \"../Device\" DevicePart : description DevicePart : has_function DevicePart : has_manufacturer DevicePart : has_model_number DevicePart : has_part DevicePart : has_serial_number DevicePart : has_setting DevicePart : has_type DevicePart : has_visual_representation DevicePart : id DevicePart : name Inheritance MaterialEntity [ MinimalMetadataMixin ] Device DevicePart Slots Name Cardinality and Range Description Inheritance has_part 0..1 String A property to provide the part of a device Device has_manufacturer 0..1 String A property to provide the vendor of a device Device has_serial_number 0..1 String A property to provide the serial number of a device Device has_model_number 0..1 String A property to provide the model number of a device Device has_function 0..1 String A property to provide the specific function of a device Device has_setting 0..1 String A property to provide a specific setting of a device Device has_visual_representation 0..1 String A property to provide a visualization of a device, such as an image, scetch o... Device has_type 0..1 String A property to provide the specific type of the class it is used on Device id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:DevicePart native michi:DevicePart LinkML Source Direct name: DevicePart description: A device which function is to be a part of another device that is used within a chemical assay. from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: Device Induced name: DevicePart description: A device which function is to be a part of another device that is used within a chemical assay. from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: Device attributes: has_part: name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part owner: DevicePart domain_of: - Device range: string has_manufacturer: name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer owner: DevicePart domain_of: - Device range: string has_serial_number: name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number owner: DevicePart domain_of: - Device range: string has_model_number: name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number owner: DevicePart domain_of: - Device range: string has_function: name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function owner: DevicePart domain_of: - Device range: string has_setting: name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting owner: DevicePart domain_of: - Device range: string has_visual_representation: name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation owner: DevicePart domain_of: - Device range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: DevicePart domain_of: - Device - ChemicalAssay range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: DevicePart domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: DevicePart domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: DevicePart domain_of: - MinimalMetadataMixin range: string","title":"Class: DevicePart"},{"location":"DevicePart/#class-devicepart","text":"A device which function is to be a part of another device that is used within a chemical assay. URI: michi:DevicePart classDiagram class DevicePart click DevicePart href \"../DevicePart\" Device <|-- DevicePart click Device href \"../Device\" DevicePart : description DevicePart : has_function DevicePart : has_manufacturer DevicePart : has_model_number DevicePart : has_part DevicePart : has_serial_number DevicePart : has_setting DevicePart : has_type DevicePart : has_visual_representation DevicePart : id DevicePart : name","title":"Class: DevicePart"},{"location":"DevicePart/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] Device DevicePart","title":"Inheritance"},{"location":"DevicePart/#slots","text":"Name Cardinality and Range Description Inheritance has_part 0..1 String A property to provide the part of a device Device has_manufacturer 0..1 String A property to provide the vendor of a device Device has_serial_number 0..1 String A property to provide the serial number of a device Device has_model_number 0..1 String A property to provide the model number of a device Device has_function 0..1 String A property to provide the specific function of a device Device has_setting 0..1 String A property to provide a specific setting of a device Device has_visual_representation 0..1 String A property to provide a visualization of a device, such as an image, scetch o... Device has_type 0..1 String A property to provide the specific type of the class it is used on Device id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"DevicePart/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DevicePart/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"DevicePart/#mappings","text":"Mapping Type Mapped Value self michi:DevicePart native michi:DevicePart","title":"Mappings"},{"location":"DevicePart/#linkml-source","text":"","title":"LinkML Source"},{"location":"DevicePart/#direct","text":"name: DevicePart description: A device which function is to be a part of another device that is used within a chemical assay. from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: Device","title":"Direct"},{"location":"DevicePart/#induced","text":"name: DevicePart description: A device which function is to be a part of another device that is used within a chemical assay. from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: Device attributes: has_part: name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part owner: DevicePart domain_of: - Device range: string has_manufacturer: name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer owner: DevicePart domain_of: - Device range: string has_serial_number: name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number owner: DevicePart domain_of: - Device range: string has_model_number: name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number owner: DevicePart domain_of: - Device range: string has_function: name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function owner: DevicePart domain_of: - Device range: string has_setting: name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting owner: DevicePart domain_of: - Device range: string has_visual_representation: name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation owner: DevicePart domain_of: - Device range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: DevicePart domain_of: - Device - ChemicalAssay range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: DevicePart domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: DevicePart domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: DevicePart domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"Double/","text":"Type: Double A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double","title":"Type: Double"},{"location":"Double/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Double/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Float/","text":"Type: Float A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float","title":"Type: Float"},{"location":"Float/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Float/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Integer/","text":"Type: Integer An integer URI: xsd:integer base : int uri : xsd:integer Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Integer"},{"location":"Integer/#type-integer","text":"An integer URI: xsd:integer base : int uri : xsd:integer","title":"Type: Integer"},{"location":"Integer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Integer/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Jsonpath/","text":"Type: Jsonpath A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Jsonpath"},{"location":"Jsonpath/#type-jsonpath","text":"A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpath"},{"location":"Jsonpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpath/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Jsonpointer/","text":"Type: Jsonpointer A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#type-jsonpointer","text":"A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpointer/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"MaterialEntity/","text":"Class: MaterialEntity Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) URI: BFO:0000040 classDiagram class MaterialEntity click MaterialEntity href \"../MaterialEntity\" MinimalMetadataMixin <|-- MaterialEntity click MinimalMetadataMixin href \"../MinimalMetadataMixin\" MaterialEntity <|-- Sample click Sample href \"../Sample\" MaterialEntity <|-- ChemicalEntity click ChemicalEntity href \"../ChemicalEntity\" MaterialEntity <|-- ChemicalSubstance click ChemicalSubstance href \"../ChemicalSubstance\" MaterialEntity <|-- Device click Device href \"../Device\" MaterialEntity : description MaterialEntity : id MaterialEntity : name Inheritance MaterialEntity [ MinimalMetadataMixin ] Sample ChemicalEntity ChemicalSubstance Device Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self BFO:0000040 native michi:MaterialEntity LinkML Source Direct name: MaterialEntity description: Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin class_uri: BFO:0000040 Induced name: MaterialEntity description: Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: MaterialEntity domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: MaterialEntity domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: MaterialEntity domain_of: - MinimalMetadataMixin range: string class_uri: BFO:0000040","title":"Class: MaterialEntity"},{"location":"MaterialEntity/#class-materialentity","text":"Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) URI: BFO:0000040 classDiagram class MaterialEntity click MaterialEntity href \"../MaterialEntity\" MinimalMetadataMixin <|-- MaterialEntity click MinimalMetadataMixin href \"../MinimalMetadataMixin\" MaterialEntity <|-- Sample click Sample href \"../Sample\" MaterialEntity <|-- ChemicalEntity click ChemicalEntity href \"../ChemicalEntity\" MaterialEntity <|-- ChemicalSubstance click ChemicalSubstance href \"../ChemicalSubstance\" MaterialEntity <|-- Device click Device href \"../Device\" MaterialEntity : description MaterialEntity : id MaterialEntity : name","title":"Class: MaterialEntity"},{"location":"MaterialEntity/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] Sample ChemicalEntity ChemicalSubstance Device","title":"Inheritance"},{"location":"MaterialEntity/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"MaterialEntity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MaterialEntity/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"MaterialEntity/#mappings","text":"Mapping Type Mapped Value self BFO:0000040 native michi:MaterialEntity","title":"Mappings"},{"location":"MaterialEntity/#linkml-source","text":"","title":"LinkML Source"},{"location":"MaterialEntity/#direct","text":"name: MaterialEntity description: Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin class_uri: BFO:0000040","title":"Direct"},{"location":"MaterialEntity/#induced","text":"name: MaterialEntity description: Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: MaterialEntity domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: MaterialEntity domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: MaterialEntity domain_of: - MinimalMetadataMixin range: string class_uri: BFO:0000040","title":"Induced"},{"location":"MinimalMetadataMixin/","text":"Class: MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema. URI: michi:MinimalMetadataMixin classDiagram class MinimalMetadataMixin click MinimalMetadataMixin href \"../MinimalMetadataMixin\" MinimalMetadataMixin <|-- Dataset click Dataset href \"../Dataset\" MinimalMetadataMixin <|-- MaterialEntity click MaterialEntity href \"../MaterialEntity\" MinimalMetadataMixin <|-- PlannedProcess click PlannedProcess href \"../PlannedProcess\" MinimalMetadataMixin <|-- ChemicalReaction click ChemicalReaction href \"../ChemicalReaction\" MinimalMetadataMixin : description MinimalMetadataMixin : id MinimalMetadataMixin : name Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing direct name 0..1 String A property to provide the human-readable name for a thing direct description 0..1 String A property to provide the human-readable description for a thing direct Mixin Usage mixed into description Dataset Represents a Dataset MaterialEntity Material entities are three-dimensional entities (entities extended in three ... PlannedProcess A process that is executed according to some plan or protocol ChemicalReaction A process between multiple chemical entities of a different kind Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:MinimalMetadataMixin native michi:MinimalMetadataMixin LinkML Source Direct name: MinimalMetadataMixin description: A mixin with the minimal required slots of a class in this schema. from_schema: https://w3id.org/NFDI4Chem/MIChI mixin: true slots: - id - name - description Induced name: MinimalMetadataMixin description: A mixin with the minimal required slots of a class in this schema. from_schema: https://w3id.org/NFDI4Chem/MIChI mixin: true attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: uriorcurie name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: string","title":"Class: MinimalMetadataMixin"},{"location":"MinimalMetadataMixin/#class-minimalmetadatamixin","text":"A mixin with the minimal required slots of a class in this schema. URI: michi:MinimalMetadataMixin classDiagram class MinimalMetadataMixin click MinimalMetadataMixin href \"../MinimalMetadataMixin\" MinimalMetadataMixin <|-- Dataset click Dataset href \"../Dataset\" MinimalMetadataMixin <|-- MaterialEntity click MaterialEntity href \"../MaterialEntity\" MinimalMetadataMixin <|-- PlannedProcess click PlannedProcess href \"../PlannedProcess\" MinimalMetadataMixin <|-- ChemicalReaction click ChemicalReaction href \"../ChemicalReaction\" MinimalMetadataMixin : description MinimalMetadataMixin : id MinimalMetadataMixin : name","title":"Class: MinimalMetadataMixin"},{"location":"MinimalMetadataMixin/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing direct name 0..1 String A property to provide the human-readable name for a thing direct description 0..1 String A property to provide the human-readable description for a thing direct","title":"Slots"},{"location":"MinimalMetadataMixin/#mixin-usage","text":"mixed into description Dataset Represents a Dataset MaterialEntity Material entities are three-dimensional entities (entities extended in three ... PlannedProcess A process that is executed according to some plan or protocol ChemicalReaction A process between multiple chemical entities of a different kind","title":"Mixin Usage"},{"location":"MinimalMetadataMixin/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MinimalMetadataMixin/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"MinimalMetadataMixin/#mappings","text":"Mapping Type Mapped Value self michi:MinimalMetadataMixin native michi:MinimalMetadataMixin","title":"Mappings"},{"location":"MinimalMetadataMixin/#linkml-source","text":"","title":"LinkML Source"},{"location":"MinimalMetadataMixin/#direct","text":"name: MinimalMetadataMixin description: A mixin with the minimal required slots of a class in this schema. from_schema: https://w3id.org/NFDI4Chem/MIChI mixin: true slots: - id - name - description","title":"Direct"},{"location":"MinimalMetadataMixin/#induced","text":"name: MinimalMetadataMixin description: A mixin with the minimal required slots of a class in this schema. from_schema: https://w3id.org/NFDI4Chem/MIChI mixin: true attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: uriorcurie name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"NFDI4Chem_MIChI/","text":"NFDI4Chem_MIChI This is the LinkML metadata schema prototype for NFDI4Chem URI: https://w3id.org/NFDI4Chem/MIChI","title":"NFDI4Chem_MIChI"},{"location":"NFDI4Chem_MIChI/#nfdi4chem_michi","text":"This is the LinkML metadata schema prototype for NFDI4Chem URI: https://w3id.org/NFDI4Chem/MIChI","title":"NFDI4Chem_MIChI"},{"location":"Ncname/","text":"Type: Ncname Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str","title":"Type: Ncname"},{"location":"Ncname/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Ncname/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Nodeidentifier/","text":"Type: Nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Nodeidentifier/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Objectidentifier/","text":"Type: Objectidentifier A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str Comments Used for inheritance and type checking Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#comments","text":"Used for inheritance and type checking","title":"Comments"},{"location":"Objectidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Objectidentifier/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"PlannedProcess/","text":"Class: PlannedProcess A process that is executed according to some plan or protocol URI: OBI:0000011 classDiagram class PlannedProcess click PlannedProcess href \"../PlannedProcess\" MinimalMetadataMixin <|-- PlannedProcess click MinimalMetadataMixin href \"../MinimalMetadataMixin\" PlannedProcess <|-- ChemicalAssay click ChemicalAssay href \"../ChemicalAssay\" PlannedProcess <|-- ChemicalAnalysis click ChemicalAnalysis href \"../ChemicalAnalysis\" PlannedProcess <|-- SamplePreparation click SamplePreparation href \"../SamplePreparation\" PlannedProcess : description PlannedProcess : has_input PlannedProcess : has_output PlannedProcess : id PlannedProcess : name Inheritance PlannedProcess [ MinimalMetadataMixin ] ChemicalAssay ChemicalAnalysis SamplePreparation Slots Name Cardinality and Range Description Inheritance has_input 0..1 String A property to provide the input of a process direct has_output 0..1 String A property to provide the output of a proces direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used PlannedProcess has_input domain PlannedProcess PlannedProcess has_output domain PlannedProcess ChemicalAssay has_input domain PlannedProcess ChemicalAssay has_output domain PlannedProcess ChemicalAnalysis has_input domain PlannedProcess ChemicalAnalysis has_output domain PlannedProcess SamplePreparation has_input domain PlannedProcess SamplePreparation has_output domain PlannedProcess Comments PS: unsure if we really need this abstract class or if its children would suffice Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self OBI:0000011 native michi:PlannedProcess LinkML Source Direct name: PlannedProcess description: A process that is executed according to some plan or protocol comments: - 'PS: unsure if we really need this abstract class or if its children would suffice' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin slots: - has_input - has_output class_uri: OBI:0000011 Induced name: PlannedProcess description: A process that is executed according to some plan or protocol comments: - 'PS: unsure if we really need this abstract class or if its children would suffice' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: PlannedProcess domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: PlannedProcess domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: PlannedProcess domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: PlannedProcess domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: PlannedProcess domain_of: - MinimalMetadataMixin range: string class_uri: OBI:0000011","title":"Class: PlannedProcess"},{"location":"PlannedProcess/#class-plannedprocess","text":"A process that is executed according to some plan or protocol URI: OBI:0000011 classDiagram class PlannedProcess click PlannedProcess href \"../PlannedProcess\" MinimalMetadataMixin <|-- PlannedProcess click MinimalMetadataMixin href \"../MinimalMetadataMixin\" PlannedProcess <|-- ChemicalAssay click ChemicalAssay href \"../ChemicalAssay\" PlannedProcess <|-- ChemicalAnalysis click ChemicalAnalysis href \"../ChemicalAnalysis\" PlannedProcess <|-- SamplePreparation click SamplePreparation href \"../SamplePreparation\" PlannedProcess : description PlannedProcess : has_input PlannedProcess : has_output PlannedProcess : id PlannedProcess : name","title":"Class: PlannedProcess"},{"location":"PlannedProcess/#inheritance","text":"PlannedProcess [ MinimalMetadataMixin ] ChemicalAssay ChemicalAnalysis SamplePreparation","title":"Inheritance"},{"location":"PlannedProcess/#slots","text":"Name Cardinality and Range Description Inheritance has_input 0..1 String A property to provide the input of a process direct has_output 0..1 String A property to provide the output of a proces direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"PlannedProcess/#usages","text":"used by used in type used PlannedProcess has_input domain PlannedProcess PlannedProcess has_output domain PlannedProcess ChemicalAssay has_input domain PlannedProcess ChemicalAssay has_output domain PlannedProcess ChemicalAnalysis has_input domain PlannedProcess ChemicalAnalysis has_output domain PlannedProcess SamplePreparation has_input domain PlannedProcess SamplePreparation has_output domain PlannedProcess","title":"Usages"},{"location":"PlannedProcess/#comments","text":"PS: unsure if we really need this abstract class or if its children would suffice","title":"Comments"},{"location":"PlannedProcess/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PlannedProcess/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"PlannedProcess/#mappings","text":"Mapping Type Mapped Value self OBI:0000011 native michi:PlannedProcess","title":"Mappings"},{"location":"PlannedProcess/#linkml-source","text":"","title":"LinkML Source"},{"location":"PlannedProcess/#direct","text":"name: PlannedProcess description: A process that is executed according to some plan or protocol comments: - 'PS: unsure if we really need this abstract class or if its children would suffice' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin slots: - has_input - has_output class_uri: OBI:0000011","title":"Direct"},{"location":"PlannedProcess/#induced","text":"name: PlannedProcess description: A process that is executed according to some plan or protocol comments: - 'PS: unsure if we really need this abstract class or if its children would suffice' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: PlannedProcess domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: PlannedProcess domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: PlannedProcess domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: PlannedProcess domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: PlannedProcess domain_of: - MinimalMetadataMixin range: string class_uri: OBI:0000011","title":"Induced"},{"location":"Protocol/","text":"Class: Protocol The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met URI: OBI:0000272 classDiagram class Protocol click Protocol href \"../Protocol\" Slots Name Cardinality and Range Description Inheritance Comments PS: wasn't discussed in the Halle Metadatathon Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self OBI:0000272 native michi:Protocol LinkML Source Direct name: Protocol description: The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI class_uri: OBI:0000272 Induced name: Protocol description: The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI class_uri: OBI:0000272","title":"Class: Protocol"},{"location":"Protocol/#class-protocol","text":"The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met URI: OBI:0000272 classDiagram class Protocol click Protocol href \"../Protocol\"","title":"Class: Protocol"},{"location":"Protocol/#slots","text":"Name Cardinality and Range Description Inheritance","title":"Slots"},{"location":"Protocol/#comments","text":"PS: wasn't discussed in the Halle Metadatathon","title":"Comments"},{"location":"Protocol/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Protocol/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Protocol/#mappings","text":"Mapping Type Mapped Value self OBI:0000272 native michi:Protocol","title":"Mappings"},{"location":"Protocol/#linkml-source","text":"","title":"LinkML Source"},{"location":"Protocol/#direct","text":"name: Protocol description: The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI class_uri: OBI:0000272","title":"Direct"},{"location":"Protocol/#induced","text":"name: Protocol description: The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI class_uri: OBI:0000272","title":"Induced"},{"location":"Sample/","text":"Class: Sample The material entity that is being evaluated to assay its attributes/characteristic. URI: michi:Sample classDiagram class Sample click Sample href \"../Sample\" MaterialEntity <|-- Sample click MaterialEntity href \"../MaterialEntity\" Sample : description Sample : has_characteristic Sample --> \"0..1\" Characteristic : has_characteristic click Characteristic href \"../Characteristic\" Sample : id Sample : name Sample : output_of_sampling_process Sample --> \"0..1\" SamplePreparation : output_of_sampling_process click SamplePreparation href \"../SamplePreparation\" Inheritance MaterialEntity [ MinimalMetadataMixin ] Sample Slots Name Cardinality and Range Description Inheritance output_of_sampling_process 0..1 SamplePreparation A property to link a sample to its creation process direct has_characteristic 0..1 Characteristic A property to provide a Characteristic of a Material Entity, such as a Sample... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used Sample output_of_sampling_process domain Sample TODOs Review with regard to the ISA model and the controlled/independent & dependent variable part Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:Sample native michi:Sample LinkML Source Direct name: Sample description: The material entity that is being evaluated to assay its attributes/characteristic. todos: - Review with regard to the ISA model and the controlled/independent & dependent variable part from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - output_of_sampling_process - has_characteristic Induced name: Sample description: The material entity that is being evaluated to assay its attributes/characteristic. todos: - Review with regard to the ISA model and the controlled/independent & dependent variable part from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: output_of_sampling_process: name: output_of_sampling_process description: A property to link a sample to its creation process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Sample alias: output_of_sampling_process owner: Sample domain_of: - Sample range: SamplePreparation has_characteristic: name: has_characteristic description: A property to provide a Characteristic of a Material Entity, such as a Sample, or a Process from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_characteristic owner: Sample domain_of: - Sample range: Characteristic id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Sample domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Sample domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Sample domain_of: - MinimalMetadataMixin range: string","title":"Class: Sample"},{"location":"Sample/#class-sample","text":"The material entity that is being evaluated to assay its attributes/characteristic. URI: michi:Sample classDiagram class Sample click Sample href \"../Sample\" MaterialEntity <|-- Sample click MaterialEntity href \"../MaterialEntity\" Sample : description Sample : has_characteristic Sample --> \"0..1\" Characteristic : has_characteristic click Characteristic href \"../Characteristic\" Sample : id Sample : name Sample : output_of_sampling_process Sample --> \"0..1\" SamplePreparation : output_of_sampling_process click SamplePreparation href \"../SamplePreparation\"","title":"Class: Sample"},{"location":"Sample/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] Sample","title":"Inheritance"},{"location":"Sample/#slots","text":"Name Cardinality and Range Description Inheritance output_of_sampling_process 0..1 SamplePreparation A property to link a sample to its creation process direct has_characteristic 0..1 Characteristic A property to provide a Characteristic of a Material Entity, such as a Sample... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"Sample/#usages","text":"used by used in type used Sample output_of_sampling_process domain Sample","title":"Usages"},{"location":"Sample/#todos","text":"Review with regard to the ISA model and the controlled/independent & dependent variable part","title":"TODOs"},{"location":"Sample/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Sample/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Sample/#mappings","text":"Mapping Type Mapped Value self michi:Sample native michi:Sample","title":"Mappings"},{"location":"Sample/#linkml-source","text":"","title":"LinkML Source"},{"location":"Sample/#direct","text":"name: Sample description: The material entity that is being evaluated to assay its attributes/characteristic. todos: - Review with regard to the ISA model and the controlled/independent & dependent variable part from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - output_of_sampling_process - has_characteristic","title":"Direct"},{"location":"Sample/#induced","text":"name: Sample description: The material entity that is being evaluated to assay its attributes/characteristic. todos: - Review with regard to the ISA model and the controlled/independent & dependent variable part from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: output_of_sampling_process: name: output_of_sampling_process description: A property to link a sample to its creation process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Sample alias: output_of_sampling_process owner: Sample domain_of: - Sample range: SamplePreparation has_characteristic: name: has_characteristic description: A property to provide a Characteristic of a Material Entity, such as a Sample, or a Process from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_characteristic owner: Sample domain_of: - Sample range: Characteristic id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Sample domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Sample domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Sample domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"SamplePreparation/","text":"Class: SamplePreparation The process in which a sample is being generated or prepared for further analysis URI: michi:SamplePreparation classDiagram class SamplePreparation click SamplePreparation href \"../SamplePreparation\" PlannedProcess <|-- SamplePreparation click PlannedProcess href \"../PlannedProcess\" SamplePreparation : description SamplePreparation : has_input SamplePreparation : has_output SamplePreparation : id SamplePreparation : name Inheritance PlannedProcess [ MinimalMetadataMixin ] SamplePreparation Slots Name Cardinality and Range Description Inheritance has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used Sample output_of_sampling_process range SamplePreparation Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:SamplePreparation native michi:SamplePreparation LinkML Source Direct name: SamplePreparation description: The process in which a sample is being generated or prepared for further analysis from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess Induced name: SamplePreparation description: The process in which a sample is being generated or prepared for further analysis from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: SamplePreparation domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: SamplePreparation domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: SamplePreparation domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: SamplePreparation domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: SamplePreparation domain_of: - MinimalMetadataMixin range: string","title":"Class: SamplePreparation"},{"location":"SamplePreparation/#class-samplepreparation","text":"The process in which a sample is being generated or prepared for further analysis URI: michi:SamplePreparation classDiagram class SamplePreparation click SamplePreparation href \"../SamplePreparation\" PlannedProcess <|-- SamplePreparation click PlannedProcess href \"../PlannedProcess\" SamplePreparation : description SamplePreparation : has_input SamplePreparation : has_output SamplePreparation : id SamplePreparation : name","title":"Class: SamplePreparation"},{"location":"SamplePreparation/#inheritance","text":"PlannedProcess [ MinimalMetadataMixin ] SamplePreparation","title":"Inheritance"},{"location":"SamplePreparation/#slots","text":"Name Cardinality and Range Description Inheritance has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"SamplePreparation/#usages","text":"used by used in type used Sample output_of_sampling_process range SamplePreparation","title":"Usages"},{"location":"SamplePreparation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"SamplePreparation/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"SamplePreparation/#mappings","text":"Mapping Type Mapped Value self michi:SamplePreparation native michi:SamplePreparation","title":"Mappings"},{"location":"SamplePreparation/#linkml-source","text":"","title":"LinkML Source"},{"location":"SamplePreparation/#direct","text":"name: SamplePreparation description: The process in which a sample is being generated or prepared for further analysis from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess","title":"Direct"},{"location":"SamplePreparation/#induced","text":"name: SamplePreparation description: The process in which a sample is being generated or prepared for further analysis from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: SamplePreparation domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: SamplePreparation domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: SamplePreparation domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: SamplePreparation domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: SamplePreparation domain_of: - 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ChemicalSubstance range: string","title":"LinkML Source"},{"location":"description/","text":"Slot: description A property to provide the human-readable description for a thing URI: dct:description Applicable Classes Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no MaterialEntity Material entities are three-dimensional entities (entities extended in three ... no Sample The material entity that is being evaluated to assay its attributes/character... no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no Dataset Represents a Dataset no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no ChemicalReaction A process between multiple chemical entities of a different kind no ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description domain_of: - 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ChemicalAssay range: string","title":"LinkML Source"},{"location":"has_function/","text":"Slot: has_function A property to provide the specific function of a device URI: michi:has_function Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function domain_of: - Device range: string","title":"Slot: has_function"},{"location":"has_function/#slot-has_function","text":"A property to provide the specific function of a device URI: michi:has_function","title":"Slot: has_function"},{"location":"has_function/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no","title":"Applicable Classes"},{"location":"has_function/#properties","text":"Range: String","title":"Properties"},{"location":"has_function/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_function/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_function/#linkml-source","text":"name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_input/","text":"Slot: has_input A property to provide the input of a process. URI: michi:has_input Inheritance has_input has_sample has_device Applicable Classes Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input domain_of: - PlannedProcess range: string","title":"Slot: has_input"},{"location":"has_input/#slot-has_input","text":"A property to provide the input of a process. URI: michi:has_input","title":"Slot: has_input"},{"location":"has_input/#inheritance","text":"has_input has_sample has_device","title":"Inheritance"},{"location":"has_input/#applicable-classes","text":"Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no","title":"Applicable Classes"},{"location":"has_input/#properties","text":"Range: String","title":"Properties"},{"location":"has_input/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_input/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_input/#linkml-source","text":"name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input domain_of: - PlannedProcess range: string","title":"LinkML Source"},{"location":"has_manufacturer/","text":"Slot: has_manufacturer A property to provide the vendor of a device URI: michi:has_manufacturer Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer domain_of: - Device range: string","title":"Slot: has_manufacturer"},{"location":"has_manufacturer/#slot-has_manufacturer","text":"A property to provide the vendor of a device URI: michi:has_manufacturer","title":"Slot: has_manufacturer"},{"location":"has_manufacturer/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no","title":"Applicable Classes"},{"location":"has_manufacturer/#properties","text":"Range: String","title":"Properties"},{"location":"has_manufacturer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_manufacturer/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_manufacturer/#linkml-source","text":"name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_model_number/","text":"Slot: has_model_number A property to provide the model number of a device URI: michi:has_model_number Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number domain_of: - Device range: string","title":"Slot: has_model_number"},{"location":"has_model_number/#slot-has_model_number","text":"A property to provide the model number of a device URI: michi:has_model_number","title":"Slot: has_model_number"},{"location":"has_model_number/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no","title":"Applicable Classes"},{"location":"has_model_number/#properties","text":"Range: String","title":"Properties"},{"location":"has_model_number/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_model_number/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_model_number/#linkml-source","text":"name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_output/","text":"Slot: has_output A property to provide the output of a proces. URI: michi:has_output Inheritance has_output produces_dataset Applicable Classes Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output domain_of: - PlannedProcess range: string","title":"Slot: has_output"},{"location":"has_output/#slot-has_output","text":"A property to provide the output of a proces. URI: michi:has_output","title":"Slot: has_output"},{"location":"has_output/#inheritance","text":"has_output produces_dataset","title":"Inheritance"},{"location":"has_output/#applicable-classes","text":"Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no","title":"Applicable Classes"},{"location":"has_output/#properties","text":"Range: String","title":"Properties"},{"location":"has_output/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_output/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_output/#linkml-source","text":"name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output domain_of: - PlannedProcess range: string","title":"LinkML Source"},{"location":"has_part/","text":"Slot: has_part A property to provide the part of a device URI: michi:has_part Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part domain_of: - Device range: string","title":"Slot: has_part"},{"location":"has_part/#slot-has_part","text":"A property to provide the part of a device URI: michi:has_part","title":"Slot: has_part"},{"location":"has_part/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no","title":"Applicable Classes"},{"location":"has_part/#properties","text":"Range: String","title":"Properties"},{"location":"has_part/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_part/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_part/#linkml-source","text":"name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_quantitative_value/","text":"Slot: has_quantitative_value A property to provide the qualitative value of a characteristic URI: michi:has_quantitative_value Applicable Classes Name Description Modifies Slot Characteristic An attribute/characteristic of an entity (which could be a material entity, i... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_quantitative_value description: A property to provide the qualitative value of a characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: has_quantitative_value domain_of: - Characteristic range: string","title":"Slot: has_quantitative_value"},{"location":"has_quantitative_value/#slot-has_quantitative_value","text":"A property to provide the qualitative value of a characteristic URI: michi:has_quantitative_value","title":"Slot: has_quantitative_value"},{"location":"has_quantitative_value/#applicable-classes","text":"Name Description Modifies Slot Characteristic An attribute/characteristic of an entity (which could be a material entity, i... no","title":"Applicable Classes"},{"location":"has_quantitative_value/#properties","text":"Range: String","title":"Properties"},{"location":"has_quantitative_value/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_quantitative_value/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_quantitative_value/#linkml-source","text":"name: has_quantitative_value description: A property to provide the qualitative value of a characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: has_quantitative_value domain_of: - Characteristic range: string","title":"LinkML Source"},{"location":"has_sample/","text":"Slot: has_sample A property to provide the sample being evaluated in a ChemicalAssay URI: michi:has_sample Inheritance has_input has_sample Applicable Classes Name Description Modifies Slot ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_sample description: A property to provide the sample being evaluated in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_sample domain_of: - ChemicalAssay range: string","title":"Slot: has_sample"},{"location":"has_sample/#slot-has_sample","text":"A property to provide the sample being evaluated in a ChemicalAssay URI: michi:has_sample","title":"Slot: has_sample"},{"location":"has_sample/#inheritance","text":"has_input has_sample","title":"Inheritance"},{"location":"has_sample/#applicable-classes","text":"Name Description Modifies Slot ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no","title":"Applicable Classes"},{"location":"has_sample/#properties","text":"Range: String","title":"Properties"},{"location":"has_sample/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_sample/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_sample/#linkml-source","text":"name: has_sample description: A property to provide the sample being evaluated in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_sample domain_of: - ChemicalAssay range: string","title":"LinkML Source"},{"location":"has_serial_number/","text":"Slot: has_serial_number A property to provide the serial number of a device URI: michi:has_serial_number Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number domain_of: - Device range: string","title":"Slot: has_serial_number"},{"location":"has_serial_number/#slot-has_serial_number","text":"A property to provide the serial number of a device URI: michi:has_serial_number","title":"Slot: has_serial_number"},{"location":"has_serial_number/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no","title":"Applicable Classes"},{"location":"has_serial_number/#properties","text":"Range: String","title":"Properties"},{"location":"has_serial_number/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_serial_number/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_serial_number/#linkml-source","text":"name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_setting/","text":"Slot: has_setting A property to provide a specific setting of a device URI: michi:has_setting Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting domain_of: - Device range: string","title":"Slot: has_setting"},{"location":"has_setting/#slot-has_setting","text":"A property to provide a specific setting of a device URI: michi:has_setting","title":"Slot: has_setting"},{"location":"has_setting/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no","title":"Applicable Classes"},{"location":"has_setting/#properties","text":"Range: String","title":"Properties"},{"location":"has_setting/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_setting/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_setting/#linkml-source","text":"name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_status/","text":"Slot: has_status A property to provide the status of a ChemicalAnalysis URI: michi:has_status Applicable Classes Name Description Modifies Slot ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no Properties Range: ChemicalAnalysisStatus Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_status description: A property to provide the status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: has_status domain_of: - ChemicalAnalysis range: ChemicalAnalysisStatus","title":"Slot: has_status"},{"location":"has_status/#slot-has_status","text":"A property to provide the status of a ChemicalAnalysis URI: michi:has_status","title":"Slot: has_status"},{"location":"has_status/#applicable-classes","text":"Name Description Modifies Slot ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no","title":"Applicable Classes"},{"location":"has_status/#properties","text":"Range: ChemicalAnalysisStatus","title":"Properties"},{"location":"has_status/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_status/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_status/#linkml-source","text":"name: has_status description: A property to provide the status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: has_status domain_of: - ChemicalAnalysis range: ChemicalAnalysisStatus","title":"LinkML Source"},{"location":"has_type/","text":"Slot: has_type A property to provide the specific type of the class it is used on. URI: michi:has_type Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no Device A used within an analysis with a specific function no Properties Range: String TODOs Reread the LinkML docs to find out how to implement this properly Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type domain_of: - Device - ChemicalAssay range: string","title":"Slot: has_type"},{"location":"has_type/#slot-has_type","text":"A property to provide the specific type of the class it is used on. URI: michi:has_type","title":"Slot: has_type"},{"location":"has_type/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no Device A used within an analysis with a specific function no","title":"Applicable Classes"},{"location":"has_type/#properties","text":"Range: String","title":"Properties"},{"location":"has_type/#todos","text":"Reread the LinkML docs to find out how to implement this properly","title":"TODOs"},{"location":"has_type/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_type/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_type/#linkml-source","text":"name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type domain_of: - Device - ChemicalAssay range: string","title":"LinkML Source"},{"location":"has_visual_representation/","text":"Slot: has_visual_representation A property to provide a visualization of a device, such as an image, scetch or schematic drawing. URI: michi:has_visual_representation Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation domain_of: - Device range: string","title":"Slot: has_visual_representation"},{"location":"has_visual_representation/#slot-has_visual_representation","text":"A property to provide a visualization of a device, such as an image, scetch or schematic drawing. URI: michi:has_visual_representation","title":"Slot: has_visual_representation"},{"location":"has_visual_representation/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no","title":"Applicable Classes"},{"location":"has_visual_representation/#properties","text":"Range: String","title":"Properties"},{"location":"has_visual_representation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_visual_representation/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_visual_representation/#linkml-source","text":"name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation domain_of: - Device range: string","title":"LinkML Source"},{"location":"id/","text":"Slot: id A property to provide the unique identifier for a thing URI: dct:identifier Applicable Classes Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no MaterialEntity Material entities are three-dimensional entities (entities extended in three ... no Sample The material entity that is being evaluated to assay its attributes/character... no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no Dataset Represents a Dataset no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no ChemicalReaction A process between multiple chemical entities of a different kind no ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no Properties Range: Uriorcurie Required: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id domain_of: - MinimalMetadataMixin range: uriorcurie required: true","title":"Slot: id"},{"location":"id/#slot-id","text":"A property to provide the unique identifier for a thing URI: dct:identifier","title":"Slot: id"},{"location":"id/#applicable-classes","text":"Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no MaterialEntity Material entities are three-dimensional entities (entities extended in three ... no Sample The material entity that is being evaluated to assay its attributes/character... no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no Dataset Represents a Dataset no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no DevicePart A device which function is to be a part of another device that is used within... no Device A used within an analysis with a specific function no ChemicalReaction A process between multiple chemical entities of a different kind no ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no","title":"Applicable Classes"},{"location":"id/#properties","text":"Range: Uriorcurie Required: True","title":"Properties"},{"location":"id/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"id/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"id/#linkml-source","text":"name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id domain_of: - MinimalMetadataMixin range: uriorcurie required: true","title":"LinkML Source"},{"location":"iupac_name/","text":"Slot: iupac_name A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. URI: michi:iupac_name Applicable Classes Name Description Modifies Slot ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name domain_of: - ChemicalEntity - ChemicalSubstance range: string","title":"Slot: iupac_name"},{"location":"iupac_name/#slot-iupac_name","text":"A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. 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think about or the other possible slots for different kinds of chemical analyses comments: - 'Examples: an assignment of chemical structures to certain peaks in a spectrum' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess slots: - has_status - based_on_assay_output Induced name: ChemicalAnalysis description: An interpretation of the data output of a ChemicalAssay todos: - think about or the other possible slots for different kinds of chemical analyses comments: - 'Examples: an assignment of chemical structures to certain peaks in a spectrum' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_status: name: has_status description: A property to provide the status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: has_status owner: ChemicalAnalysis domain_of: - ChemicalAnalysis range: ChemicalAnalysisStatus based_on_assay_output: name: based_on_assay_output description: The status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: based_on_assay_output owner: ChemicalAnalysis domain_of: - ChemicalAnalysis range: string has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: ChemicalAnalysis domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: ChemicalAnalysis domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: string","title":"Class: ChemicalAnalysis"},{"location":"ChemicalAnalysis/#class-chemicalanalysis","text":"An interpretation of the data output of a ChemicalAssay URI: michi:ChemicalAnalysis classDiagram class ChemicalAnalysis click ChemicalAnalysis href \"../ChemicalAnalysis\" PlannedProcess <|-- ChemicalAnalysis click PlannedProcess href \"../PlannedProcess\" ChemicalAnalysis : based_on_assay_output ChemicalAnalysis : description ChemicalAnalysis : has_input ChemicalAnalysis : has_output ChemicalAnalysis : has_status ChemicalAnalysis --> \"0..1\" ChemicalAnalysisStatus : has_status click ChemicalAnalysisStatus href \"../ChemicalAnalysisStatus\" ChemicalAnalysis : id ChemicalAnalysis : name","title":"Class: ChemicalAnalysis"},{"location":"ChemicalAnalysis/#inheritance","text":"PlannedProcess [ MinimalMetadataMixin ] ChemicalAnalysis","title":"Inheritance"},{"location":"ChemicalAnalysis/#slots","text":"Name Cardinality and Range Description Inheritance has_status 0..1 ChemicalAnalysisStatus A property to provide the status of a ChemicalAnalysis direct based_on_assay_output 0..1 String The status of a ChemicalAnalysis direct has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalAnalysis/#usages","text":"used by used in type used ChemicalAnalysis has_status domain ChemicalAnalysis ChemicalAnalysis based_on_assay_output domain ChemicalAnalysis","title":"Usages"},{"location":"ChemicalAnalysis/#comments","text":"Examples: an assignment of chemical structures to certain peaks in a spectrum","title":"Comments"},{"location":"ChemicalAnalysis/#todos","text":"think about or the other possible slots for different kinds of chemical analyses","title":"TODOs"},{"location":"ChemicalAnalysis/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalAnalysis/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalAnalysis/#mappings","text":"Mapping Type Mapped Value self michi:ChemicalAnalysis native michi:ChemicalAnalysis","title":"Mappings"},{"location":"ChemicalAnalysis/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalAnalysis/#direct","text":"name: ChemicalAnalysis description: An interpretation of the data output of a ChemicalAssay todos: - think about or the other possible slots for different kinds of chemical analyses comments: - 'Examples: an assignment of chemical structures to certain peaks in a spectrum' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess slots: - has_status - based_on_assay_output","title":"Direct"},{"location":"ChemicalAnalysis/#induced","text":"name: ChemicalAnalysis description: An interpretation of the data output of a ChemicalAssay todos: - think about or the other possible slots for different kinds of chemical analyses comments: - 'Examples: an assignment of chemical structures to certain peaks in a spectrum' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_status: name: has_status description: A property to provide the status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: has_status owner: ChemicalAnalysis domain_of: - ChemicalAnalysis range: ChemicalAnalysisStatus based_on_assay_output: name: based_on_assay_output description: The status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: based_on_assay_output owner: ChemicalAnalysis domain_of: - ChemicalAnalysis range: string has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: ChemicalAnalysis domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: ChemicalAnalysis domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalAnalysis domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"ChemicalAnalysisStatus/","text":"Enum: ChemicalAnalysisStatus URI: ChemicalAnalysisStatus Permissible Values Value Meaning Description PLANNED None the chemical analysis is planned but has not been executed IN_PROGRESS None the chemical analysis is in the making DONE None the chemical analysis is in the done CONFIRMED None the chemical analysis has been confirmed by a peer UNCONFIRMED None the chemical analysis has not yet been confirmed by a peer Slots Name Description has_status A property to provide the status of a ChemicalAnalysis Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: ChemicalAnalysisStatus from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 permissible_values: PLANNED: text: PLANNED description: the chemical analysis is planned but has not been executed IN_PROGRESS: text: IN_PROGRESS description: the chemical analysis is in the making DONE: text: DONE description: the chemical analysis is in the done CONFIRMED: text: CONFIRMED description: the chemical analysis has been confirmed by a peer UNCONFIRMED: text: UNCONFIRMED description: the chemical analysis has not yet been confirmed by a peer","title":"Enum: ChemicalAnalysisStatus"},{"location":"ChemicalAnalysisStatus/#enum-chemicalanalysisstatus","text":"URI: ChemicalAnalysisStatus","title":"Enum: ChemicalAnalysisStatus"},{"location":"ChemicalAnalysisStatus/#permissible-values","text":"Value Meaning Description PLANNED None the chemical analysis is planned but has not been executed IN_PROGRESS None the chemical analysis is in the making DONE None the chemical analysis is in the done CONFIRMED None the chemical analysis has been confirmed by a peer UNCONFIRMED None the chemical analysis has not yet been confirmed by a peer","title":"Permissible Values"},{"location":"ChemicalAnalysisStatus/#slots","text":"Name Description has_status A property to provide the status of a ChemicalAnalysis","title":"Slots"},{"location":"ChemicalAnalysisStatus/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalAnalysisStatus/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalAnalysisStatus/#linkml-source","text":"name: ChemicalAnalysisStatus from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 permissible_values: PLANNED: text: PLANNED description: the chemical analysis is planned but has not been executed IN_PROGRESS: text: IN_PROGRESS description: the chemical analysis is in the making DONE: text: DONE description: the chemical analysis is in the done CONFIRMED: text: CONFIRMED description: the chemical analysis has been confirmed by a peer UNCONFIRMED: text: UNCONFIRMED description: the chemical analysis has not yet been confirmed by a peer","title":"LinkML Source"},{"location":"ChemicalAssay/","text":"Class: ChemicalAssay The planned process to chemically assay a sample in order to determine some characteristic of it. URI: OBI:0000070 classDiagram class ChemicalAssay click ChemicalAssay href \"../ChemicalAssay\" PlannedProcess <|-- ChemicalAssay click PlannedProcess href \"../PlannedProcess\" ChemicalAssay : description ChemicalAssay : has_device ChemicalAssay : has_input ChemicalAssay : has_output ChemicalAssay : has_sample ChemicalAssay : has_type ChemicalAssay : id ChemicalAssay : name ChemicalAssay : produces_dataset Inheritance PlannedProcess [ MinimalMetadataMixin ] ChemicalAssay Slots Name Cardinality and Range Description Inheritance has_sample 0..1 String A property to provide the sample being evaluated in a ChemicalAssay direct has_device 0..1 String A property to provide the device being used in a ChemicalAssay direct produces_dataset 0..1 String A property to provide the dataset being produced by a ChemicalAnalysis or Che... direct has_type 0..1 String A property to provide the specific type of the class it is used on direct has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used ChemicalAssay has_sample domain ChemicalAssay ChemicalAssay has_device domain ChemicalAssay ChemicalAssay produces_dataset domain ChemicalAssay Comments Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self OBI:0000070 native michi:ChemicalAssay LinkML Source Direct name: ChemicalAssay description: The planned process to chemically assay a sample in order to determine some characteristic of it. comments: - 'Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess slots: - has_sample - has_device - produces_dataset - has_type class_uri: OBI:0000070 Induced name: ChemicalAssay description: The planned process to chemically assay a sample in order to determine some characteristic of it. comments: - 'Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_sample: name: has_sample description: A property to provide the sample being evaluated in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_sample owner: ChemicalAssay domain_of: - ChemicalAssay range: string has_device: name: has_device description: A property to provide the device being used in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_device owner: ChemicalAssay domain_of: - ChemicalAssay range: string produces_dataset: name: produces_dataset description: A property to provide the dataset being produced by a ChemicalAnalysis or ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_output domain: ChemicalAssay alias: produces_dataset owner: ChemicalAssay domain_of: - ChemicalAssay range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: ChemicalAssay domain_of: - Device - ChemicalAssay range: string has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: ChemicalAssay domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: ChemicalAssay domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: string class_uri: OBI:0000070","title":"Class: ChemicalAssay"},{"location":"ChemicalAssay/#class-chemicalassay","text":"The planned process to chemically assay a sample in order to determine some characteristic of it. URI: OBI:0000070 classDiagram class ChemicalAssay click ChemicalAssay href \"../ChemicalAssay\" PlannedProcess <|-- ChemicalAssay click PlannedProcess href \"../PlannedProcess\" ChemicalAssay : description ChemicalAssay : has_device ChemicalAssay : has_input ChemicalAssay : has_output ChemicalAssay : has_sample ChemicalAssay : has_type ChemicalAssay : id ChemicalAssay : name ChemicalAssay : produces_dataset","title":"Class: ChemicalAssay"},{"location":"ChemicalAssay/#inheritance","text":"PlannedProcess [ MinimalMetadataMixin ] ChemicalAssay","title":"Inheritance"},{"location":"ChemicalAssay/#slots","text":"Name Cardinality and Range Description Inheritance has_sample 0..1 String A property to provide the sample being evaluated in a ChemicalAssay direct has_device 0..1 String A property to provide the device being used in a ChemicalAssay direct produces_dataset 0..1 String A property to provide the dataset being produced by a ChemicalAnalysis or Che... direct has_type 0..1 String A property to provide the specific type of the class it is used on direct has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalAssay/#usages","text":"used by used in type used ChemicalAssay has_sample domain ChemicalAssay ChemicalAssay has_device domain ChemicalAssay ChemicalAssay produces_dataset domain ChemicalAssay","title":"Usages"},{"location":"ChemicalAssay/#comments","text":"Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample","title":"Comments"},{"location":"ChemicalAssay/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalAssay/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalAssay/#mappings","text":"Mapping Type Mapped Value self OBI:0000070 native michi:ChemicalAssay","title":"Mappings"},{"location":"ChemicalAssay/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalAssay/#direct","text":"name: ChemicalAssay description: The planned process to chemically assay a sample in order to determine some characteristic of it. comments: - 'Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess slots: - has_sample - has_device - produces_dataset - has_type class_uri: OBI:0000070","title":"Direct"},{"location":"ChemicalAssay/#induced","text":"name: ChemicalAssay description: The planned process to chemically assay a sample in order to determine some characteristic of it. comments: - 'Examples: a certain Raman spectroscopy performed to determine the Raman shift of some sample' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_sample: name: has_sample description: A property to provide the sample being evaluated in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_sample owner: ChemicalAssay domain_of: - ChemicalAssay range: string has_device: name: has_device description: A property to provide the device being used in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_device owner: ChemicalAssay domain_of: - ChemicalAssay range: string produces_dataset: name: produces_dataset description: A property to provide the dataset being produced by a ChemicalAnalysis or ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_output domain: ChemicalAssay alias: produces_dataset owner: ChemicalAssay domain_of: - ChemicalAssay range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: ChemicalAssay domain_of: - Device - ChemicalAssay range: string has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: ChemicalAssay domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: ChemicalAssay domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalAssay domain_of: - MinimalMetadataMixin range: string class_uri: OBI:0000070","title":"Induced"},{"location":"ChemicalEntity/","text":"Class: ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. URI: CHEBI:23367 classDiagram class ChemicalEntity click ChemicalEntity href \"../ChemicalEntity\" MaterialEntity <|-- ChemicalEntity click MaterialEntity href \"../MaterialEntity\" ChemicalEntity : description ChemicalEntity : id ChemicalEntity : iupac_name ChemicalEntity : name Inheritance MaterialEntity [ MinimalMetadataMixin ] ChemicalEntity Slots Name Cardinality and Range Description Inheritance iupac_name 0..1 String A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Comments This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self CHEBI:23367 native michi:ChemicalEntity LinkML Source Direct name: ChemicalEntity description: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. comments: - This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance - There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - iupac_name class_uri: CHEBI:23367 Induced name: ChemicalEntity description: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. comments: - This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance - There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: iupac_name: name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name owner: ChemicalEntity domain_of: - ChemicalEntity - ChemicalSubstance range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: string class_uri: CHEBI:23367","title":"Class: ChemicalEntity"},{"location":"ChemicalEntity/#class-chemicalentity","text":"Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. URI: CHEBI:23367 classDiagram class ChemicalEntity click ChemicalEntity href \"../ChemicalEntity\" MaterialEntity <|-- ChemicalEntity click MaterialEntity href \"../MaterialEntity\" ChemicalEntity : description ChemicalEntity : id ChemicalEntity : iupac_name ChemicalEntity : name","title":"Class: ChemicalEntity"},{"location":"ChemicalEntity/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] ChemicalEntity","title":"Inheritance"},{"location":"ChemicalEntity/#slots","text":"Name Cardinality and Range Description Inheritance iupac_name 0..1 String A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalEntity/#comments","text":"This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list?","title":"Comments"},{"location":"ChemicalEntity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalEntity/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalEntity/#mappings","text":"Mapping Type Mapped Value self CHEBI:23367 native michi:ChemicalEntity","title":"Mappings"},{"location":"ChemicalEntity/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalEntity/#direct","text":"name: ChemicalEntity description: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. comments: - This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance - There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - iupac_name class_uri: CHEBI:23367","title":"Direct"},{"location":"ChemicalEntity/#induced","text":"name: ChemicalEntity description: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. comments: - This is actually mapped to CHEBI:molecular entity (CHEBI:23367), from which we just copied the definition into our description. We did so to be able to reuse the label Chemical Entity. We do not use (ignore) the chemical entity class from CHEBI as this is only a grouping class, and chemical entity is rather that which constitutes a chemical substance - There was the issue with theoretical chemist postulating chemical entities that are not physical existing --> write/ask in the OBO or BFO discuss list? from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: iupac_name: name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name owner: ChemicalEntity domain_of: - ChemicalEntity - ChemicalSubstance range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalEntity domain_of: - MinimalMetadataMixin range: string class_uri: CHEBI:23367","title":"Induced"},{"location":"ChemicalReaction/","text":"Class: ChemicalReaction A process between multiple chemical entities of a different kind. URI: michi:ChemicalReaction classDiagram class ChemicalReaction click ChemicalReaction href \"../ChemicalReaction\" MinimalMetadataMixin <|-- ChemicalReaction click MinimalMetadataMixin href \"../MinimalMetadataMixin\" ChemicalReaction : description ChemicalReaction : id ChemicalReaction : name Inheritance ChemicalReaction [ MinimalMetadataMixin ] Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin TODOs improve description Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:ChemicalReaction native michi:ChemicalReaction LinkML Source Direct name: ChemicalReaction description: A process between multiple chemical entities of a different kind. todos: - improve description from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin Induced name: ChemicalReaction description: A process between multiple chemical entities of a different kind. todos: - improve description from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: string","title":"Class: ChemicalReaction"},{"location":"ChemicalReaction/#class-chemicalreaction","text":"A process between multiple chemical entities of a different kind. URI: michi:ChemicalReaction classDiagram class ChemicalReaction click ChemicalReaction href \"../ChemicalReaction\" MinimalMetadataMixin <|-- ChemicalReaction click MinimalMetadataMixin href \"../MinimalMetadataMixin\" ChemicalReaction : description ChemicalReaction : id ChemicalReaction : name","title":"Class: ChemicalReaction"},{"location":"ChemicalReaction/#inheritance","text":"ChemicalReaction [ MinimalMetadataMixin ]","title":"Inheritance"},{"location":"ChemicalReaction/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalReaction/#todos","text":"improve description","title":"TODOs"},{"location":"ChemicalReaction/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalReaction/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalReaction/#mappings","text":"Mapping Type Mapped Value self michi:ChemicalReaction native michi:ChemicalReaction","title":"Mappings"},{"location":"ChemicalReaction/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalReaction/#direct","text":"name: ChemicalReaction description: A process between multiple chemical entities of a different kind. todos: - improve description from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin","title":"Direct"},{"location":"ChemicalReaction/#induced","text":"name: ChemicalReaction description: A process between multiple chemical entities of a different kind. todos: - improve description from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalReaction domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"ChemicalSubstance/","text":"Class: ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind URI: CHEBI:59999 classDiagram class ChemicalSubstance click ChemicalSubstance href \"../ChemicalSubstance\" MaterialEntity <|-- ChemicalSubstance click MaterialEntity href \"../MaterialEntity\" ChemicalSubstance : composed_of_chemical_entity ChemicalSubstance : description ChemicalSubstance : id ChemicalSubstance : iupac_name ChemicalSubstance : name ChemicalSubstance : provenance ChemicalSubstance : space_group Inheritance MaterialEntity [ MinimalMetadataMixin ] ChemicalSubstance Slots Name Cardinality and Range Description Inheritance provenance 0..1 String A property to provide a specific setting of a device direct composed_of_chemical_entity * String A property to provide the chemical entities of which a chemical substance is ... direct space_group 0..1 String A property to provide the space group of a Chemical Substance direct iupac_name 0..1 String A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used ChemicalSubstance provenance domain ChemicalSubstance ChemicalSubstance composed_of_chemical_entity domain ChemicalSubstance ChemicalSubstance space_group domain ChemicalSubstance Comments CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types. Examples: a polymer, a mixture of ethanol and methanol, O2 Ti TODOs we need to describe ratios of chemical entities in a chemical substance Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self CHEBI:59999 native michi:ChemicalSubstance LinkML Source Direct name: ChemicalSubstance description: A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind todos: - we need to describe ratios of chemical entities in a chemical substance comments: - 'CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.' - 'Examples: a polymer, a mixture of ethanol and methanol, O2 Ti' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - provenance - composed_of_chemical_entity - space_group - iupac_name class_uri: CHEBI:59999 Induced name: ChemicalSubstance description: A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind todos: - we need to describe ratios of chemical entities in a chemical substance comments: - 'CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.' - 'Examples: a polymer, a mixture of ethanol and methanol, O2 Ti' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: provenance: name: provenance description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: provenance owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string composed_of_chemical_entity: name: composed_of_chemical_entity description: A property to provide the chemical entities of which a chemical substance is composed of. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance multivalued: true alias: composed_of_chemical_entity owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string space_group: name: space_group description: A property to provide the space group of a Chemical Substance. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: space_group owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string iupac_name: name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name owner: ChemicalSubstance domain_of: - ChemicalEntity - ChemicalSubstance range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: string class_uri: CHEBI:59999","title":"Class: ChemicalSubstance"},{"location":"ChemicalSubstance/#class-chemicalsubstance","text":"A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind URI: CHEBI:59999 classDiagram class ChemicalSubstance click ChemicalSubstance href \"../ChemicalSubstance\" MaterialEntity <|-- ChemicalSubstance click MaterialEntity href \"../MaterialEntity\" ChemicalSubstance : composed_of_chemical_entity ChemicalSubstance : description ChemicalSubstance : id ChemicalSubstance : iupac_name ChemicalSubstance : name ChemicalSubstance : provenance ChemicalSubstance : space_group","title":"Class: ChemicalSubstance"},{"location":"ChemicalSubstance/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] ChemicalSubstance","title":"Inheritance"},{"location":"ChemicalSubstance/#slots","text":"Name Cardinality and Range Description Inheritance provenance 0..1 String A property to provide a specific setting of a device direct composed_of_chemical_entity * String A property to provide the chemical entities of which a chemical substance is ... direct space_group 0..1 String A property to provide the space group of a Chemical Substance direct iupac_name 0..1 String A property to provide the IUPAC name of a Chemical Substance or Chemical Enti... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"ChemicalSubstance/#usages","text":"used by used in type used ChemicalSubstance provenance domain ChemicalSubstance ChemicalSubstance composed_of_chemical_entity domain ChemicalSubstance ChemicalSubstance space_group domain ChemicalSubstance","title":"Usages"},{"location":"ChemicalSubstance/#comments","text":"CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types. Examples: a polymer, a mixture of ethanol and methanol, O2 Ti","title":"Comments"},{"location":"ChemicalSubstance/#todos","text":"we need to describe ratios of chemical entities in a chemical substance","title":"TODOs"},{"location":"ChemicalSubstance/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"ChemicalSubstance/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"ChemicalSubstance/#mappings","text":"Mapping Type Mapped Value self CHEBI:59999 native michi:ChemicalSubstance","title":"Mappings"},{"location":"ChemicalSubstance/#linkml-source","text":"","title":"LinkML Source"},{"location":"ChemicalSubstance/#direct","text":"name: ChemicalSubstance description: A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind todos: - we need to describe ratios of chemical entities in a chemical substance comments: - 'CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.' - 'Examples: a polymer, a mixture of ethanol and methanol, O2 Ti' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - provenance - composed_of_chemical_entity - space_group - iupac_name class_uri: CHEBI:59999","title":"Direct"},{"location":"ChemicalSubstance/#induced","text":"name: ChemicalSubstance description: A MaterialEntity that is composed of multiple Chemical Entities of either the same or different kind todos: - we need to describe ratios of chemical entities in a chemical substance comments: - 'CHEBI definition: A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types.' - 'Examples: a polymer, a mixture of ethanol and methanol, O2 Ti' from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: provenance: name: provenance description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: provenance owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string composed_of_chemical_entity: name: composed_of_chemical_entity description: A property to provide the chemical entities of which a chemical substance is composed of. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance multivalued: true alias: composed_of_chemical_entity owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string space_group: name: space_group description: A property to provide the space group of a Chemical Substance. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: space_group owner: ChemicalSubstance domain_of: - ChemicalSubstance range: string iupac_name: name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name owner: ChemicalSubstance domain_of: - ChemicalEntity - ChemicalSubstance range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: ChemicalSubstance domain_of: - MinimalMetadataMixin range: string class_uri: CHEBI:59999","title":"Induced"},{"location":"Curie/","text":"Type: Curie a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str Comments in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Curie"},{"location":"Curie/#type-curie","text":"a compact URI URI: xsd:string base : Curie uri : xsd:string repr : str","title":"Type: Curie"},{"location":"Curie/#comments","text":"in RDF serializations this MUST be expanded to a URI in non-RDF serializations MAY be serialized as the compact representation","title":"Comments"},{"location":"Curie/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Curie/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Dataset/","text":"Class: Dataset Represents a Dataset URI: michi:Dataset classDiagram class Dataset click Dataset href \"../Dataset\" MinimalMetadataMixin <|-- Dataset click MinimalMetadataMixin href \"../MinimalMetadataMixin\" Dataset : description Dataset : id Dataset : name Inheritance Dataset [ MinimalMetadataMixin ] Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used DatasetCollection entries range Dataset Comments PS: wasn't discussed in the Halle Metadatathon Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:Dataset native michi:Dataset LinkML Source Direct name: Dataset description: Represents a Dataset comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin Induced name: Dataset description: Represents a Dataset comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Dataset domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Dataset domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Dataset domain_of: - MinimalMetadataMixin range: string","title":"Class: Dataset"},{"location":"Dataset/#class-dataset","text":"Represents a Dataset URI: michi:Dataset classDiagram class Dataset click Dataset href \"../Dataset\" MinimalMetadataMixin <|-- Dataset click MinimalMetadataMixin href \"../MinimalMetadataMixin\" Dataset : description Dataset : id Dataset : name","title":"Class: Dataset"},{"location":"Dataset/#inheritance","text":"Dataset [ MinimalMetadataMixin ]","title":"Inheritance"},{"location":"Dataset/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"Dataset/#usages","text":"used by used in type used DatasetCollection entries range Dataset","title":"Usages"},{"location":"Dataset/#comments","text":"PS: wasn't discussed in the Halle Metadatathon","title":"Comments"},{"location":"Dataset/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Dataset/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Dataset/#mappings","text":"Mapping Type Mapped Value self michi:Dataset native michi:Dataset","title":"Mappings"},{"location":"Dataset/#linkml-source","text":"","title":"LinkML Source"},{"location":"Dataset/#direct","text":"name: Dataset description: Represents a Dataset comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin","title":"Direct"},{"location":"Dataset/#induced","text":"name: Dataset description: Represents a Dataset comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Dataset domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Dataset domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Dataset domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"DatasetCollection/","text":"Class: DatasetCollection A holder for Dataset objects URI: michi:DatasetCollection classDiagram class DatasetCollection click DatasetCollection href \"../DatasetCollection\" DatasetCollection : entries DatasetCollection --> \"*\" Dataset : entries click Dataset href \"../Dataset\" Slots Name Cardinality and Range Description Inheritance entries * Dataset direct Comments PS: wasn't discussed in the Halle Metadatathon Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:DatasetCollection native michi:DatasetCollection LinkML Source Direct name: DatasetCollection description: A holder for Dataset objects comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: entries: name: entries from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 multivalued: true domain_of: - DatasetCollection range: Dataset inlined: true tree_root: true Induced name: DatasetCollection description: A holder for Dataset objects comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: entries: name: entries from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 multivalued: true alias: entries owner: DatasetCollection domain_of: - DatasetCollection range: Dataset inlined: true tree_root: true","title":"Class: DatasetCollection"},{"location":"DatasetCollection/#class-datasetcollection","text":"A holder for Dataset objects URI: michi:DatasetCollection classDiagram class DatasetCollection click DatasetCollection href \"../DatasetCollection\" DatasetCollection : entries DatasetCollection --> \"*\" Dataset : entries click Dataset href \"../Dataset\"","title":"Class: DatasetCollection"},{"location":"DatasetCollection/#slots","text":"Name Cardinality and Range Description Inheritance entries * Dataset direct","title":"Slots"},{"location":"DatasetCollection/#comments","text":"PS: wasn't discussed in the Halle Metadatathon","title":"Comments"},{"location":"DatasetCollection/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DatasetCollection/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"DatasetCollection/#mappings","text":"Mapping Type Mapped Value self michi:DatasetCollection native michi:DatasetCollection","title":"Mappings"},{"location":"DatasetCollection/#linkml-source","text":"","title":"LinkML Source"},{"location":"DatasetCollection/#direct","text":"name: DatasetCollection description: A holder for Dataset objects comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: entries: name: entries from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 multivalued: true domain_of: - DatasetCollection range: Dataset inlined: true tree_root: true","title":"Direct"},{"location":"DatasetCollection/#induced","text":"name: DatasetCollection description: A holder for Dataset objects comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI attributes: entries: name: entries from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 multivalued: true alias: entries owner: DatasetCollection domain_of: - DatasetCollection range: Dataset inlined: true tree_root: true","title":"Induced"},{"location":"Date/","text":"Type: Date a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Date"},{"location":"Date/#type-date","text":"a date (year, month and day) in an idealized calendar URI: xsd:date base : XSDDate uri : xsd:date repr : str","title":"Type: Date"},{"location":"Date/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Date/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"DateOrDatetime/","text":"Type: DateOrDatetime Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#type-dateordatetime","text":"Either a date or a datetime URI: linkml:DateOrDatetime base : str uri : linkml:DateOrDatetime repr : str","title":"Type: DateOrDatetime"},{"location":"DateOrDatetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DateOrDatetime/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Datetime/","text":"Type: Datetime The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Datetime"},{"location":"Datetime/#type-datetime","text":"The combination of a date and time URI: xsd:dateTime base : XSDDateTime uri : xsd:dateTime repr : str","title":"Type: Datetime"},{"location":"Datetime/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Datetime/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Decimal/","text":"Type: Decimal A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Decimal"},{"location":"Decimal/#type-decimal","text":"A real number with arbitrary precision that conforms to the xsd:decimal specification URI: xsd:decimal base : Decimal uri : xsd:decimal","title":"Type: Decimal"},{"location":"Decimal/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Decimal/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Device/","text":"Class: Device A used within an analysis with a specific function URI: michi:Device classDiagram class Device click Device href \"../Device\" MaterialEntity <|-- Device click MaterialEntity href \"../MaterialEntity\" Device <|-- DevicePart click DevicePart href \"../DevicePart\" Device : description Device : has_function Device : has_manufacturer Device : has_model_number Device : has_part Device : has_serial_number Device : has_setting Device : has_type Device : has_visual_representation Device : id Device : name Inheritance MaterialEntity [ MinimalMetadataMixin ] Device DevicePart Slots Name Cardinality and Range Description Inheritance has_part 0..1 String A property to provide the part of a device direct has_manufacturer 0..1 String A property to provide the vendor of a device direct has_serial_number 0..1 String A property to provide the serial number of a device direct has_model_number 0..1 String A property to provide the model number of a device direct has_function 0..1 String A property to provide the specific function of a device direct has_setting 0..1 String A property to provide a specific setting of a device direct has_visual_representation 0..1 String A property to provide a visualization of a device, such as an image, scetch o... direct has_type 0..1 String A property to provide the specific type of the class it is used on direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:Device native michi:Device LinkML Source Direct name: Device description: A used within an analysis with a specific function from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - has_part - has_manufacturer - has_serial_number - has_model_number - has_function - has_setting - has_visual_representation - has_type Induced name: Device description: A used within an analysis with a specific function from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: has_part: name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part owner: Device domain_of: - Device range: string has_manufacturer: name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer owner: Device domain_of: - Device range: string has_serial_number: name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number owner: Device domain_of: - Device range: string has_model_number: name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number owner: Device domain_of: - Device range: string has_function: name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function owner: Device domain_of: - Device range: string has_setting: name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting owner: Device domain_of: - Device range: string has_visual_representation: name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation owner: Device domain_of: - Device range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: Device domain_of: - Device - ChemicalAssay range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Device domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Device domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Device domain_of: - MinimalMetadataMixin range: string","title":"Class: Device"},{"location":"Device/#class-device","text":"A used within an analysis with a specific function URI: michi:Device classDiagram class Device click Device href \"../Device\" MaterialEntity <|-- Device click MaterialEntity href \"../MaterialEntity\" Device <|-- DevicePart click DevicePart href \"../DevicePart\" Device : description Device : has_function Device : has_manufacturer Device : has_model_number Device : has_part Device : has_serial_number Device : has_setting Device : has_type Device : has_visual_representation Device : id Device : name","title":"Class: Device"},{"location":"Device/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] Device DevicePart","title":"Inheritance"},{"location":"Device/#slots","text":"Name Cardinality and Range Description Inheritance has_part 0..1 String A property to provide the part of a device direct has_manufacturer 0..1 String A property to provide the vendor of a device direct has_serial_number 0..1 String A property to provide the serial number of a device direct has_model_number 0..1 String A property to provide the model number of a device direct has_function 0..1 String A property to provide the specific function of a device direct has_setting 0..1 String A property to provide a specific setting of a device direct has_visual_representation 0..1 String A property to provide a visualization of a device, such as an image, scetch o... direct has_type 0..1 String A property to provide the specific type of the class it is used on direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"Device/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Device/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Device/#mappings","text":"Mapping Type Mapped Value self michi:Device native michi:Device","title":"Mappings"},{"location":"Device/#linkml-source","text":"","title":"LinkML Source"},{"location":"Device/#direct","text":"name: Device description: A used within an analysis with a specific function from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - has_part - has_manufacturer - has_serial_number - has_model_number - has_function - has_setting - has_visual_representation - has_type","title":"Direct"},{"location":"Device/#induced","text":"name: Device description: A used within an analysis with a specific function from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: has_part: name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part owner: Device domain_of: - Device range: string has_manufacturer: name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer owner: Device domain_of: - Device range: string has_serial_number: name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number owner: Device domain_of: - Device range: string has_model_number: name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number owner: Device domain_of: - Device range: string has_function: name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function owner: Device domain_of: - Device range: string has_setting: name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting owner: Device domain_of: - Device range: string has_visual_representation: name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation owner: Device domain_of: - Device range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: Device domain_of: - Device - ChemicalAssay range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Device domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Device domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Device domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"DevicePart/","text":"Class: DevicePart A device which function is to be a part of another device that is used within a chemical assay. URI: michi:DevicePart classDiagram class DevicePart click DevicePart href \"../DevicePart\" Device <|-- DevicePart click Device href \"../Device\" DevicePart : description DevicePart : has_function DevicePart : has_manufacturer DevicePart : has_model_number DevicePart : has_part DevicePart : has_serial_number DevicePart : has_setting DevicePart : has_type DevicePart : has_visual_representation DevicePart : id DevicePart : name Inheritance MaterialEntity [ MinimalMetadataMixin ] Device DevicePart Slots Name Cardinality and Range Description Inheritance has_part 0..1 String A property to provide the part of a device Device has_manufacturer 0..1 String A property to provide the vendor of a device Device has_serial_number 0..1 String A property to provide the serial number of a device Device has_model_number 0..1 String A property to provide the model number of a device Device has_function 0..1 String A property to provide the specific function of a device Device has_setting 0..1 String A property to provide a specific setting of a device Device has_visual_representation 0..1 String A property to provide a visualization of a device, such as an image, scetch o... Device has_type 0..1 String A property to provide the specific type of the class it is used on Device id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:DevicePart native michi:DevicePart LinkML Source Direct name: DevicePart description: A device which function is to be a part of another device that is used within a chemical assay. from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: Device Induced name: DevicePart description: A device which function is to be a part of another device that is used within a chemical assay. from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: Device attributes: has_part: name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part owner: DevicePart domain_of: - Device range: string has_manufacturer: name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer owner: DevicePart domain_of: - Device range: string has_serial_number: name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number owner: DevicePart domain_of: - Device range: string has_model_number: name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number owner: DevicePart domain_of: - Device range: string has_function: name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function owner: DevicePart domain_of: - Device range: string has_setting: name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting owner: DevicePart domain_of: - Device range: string has_visual_representation: name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation owner: DevicePart domain_of: - Device range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: DevicePart domain_of: - Device - ChemicalAssay range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: DevicePart domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: DevicePart domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: DevicePart domain_of: - MinimalMetadataMixin range: string","title":"Class: DevicePart"},{"location":"DevicePart/#class-devicepart","text":"A device which function is to be a part of another device that is used within a chemical assay. URI: michi:DevicePart classDiagram class DevicePart click DevicePart href \"../DevicePart\" Device <|-- DevicePart click Device href \"../Device\" DevicePart : description DevicePart : has_function DevicePart : has_manufacturer DevicePart : has_model_number DevicePart : has_part DevicePart : has_serial_number DevicePart : has_setting DevicePart : has_type DevicePart : has_visual_representation DevicePart : id DevicePart : name","title":"Class: DevicePart"},{"location":"DevicePart/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] Device DevicePart","title":"Inheritance"},{"location":"DevicePart/#slots","text":"Name Cardinality and Range Description Inheritance has_part 0..1 String A property to provide the part of a device Device has_manufacturer 0..1 String A property to provide the vendor of a device Device has_serial_number 0..1 String A property to provide the serial number of a device Device has_model_number 0..1 String A property to provide the model number of a device Device has_function 0..1 String A property to provide the specific function of a device Device has_setting 0..1 String A property to provide a specific setting of a device Device has_visual_representation 0..1 String A property to provide a visualization of a device, such as an image, scetch o... Device has_type 0..1 String A property to provide the specific type of the class it is used on Device id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"DevicePart/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"DevicePart/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"DevicePart/#mappings","text":"Mapping Type Mapped Value self michi:DevicePart native michi:DevicePart","title":"Mappings"},{"location":"DevicePart/#linkml-source","text":"","title":"LinkML Source"},{"location":"DevicePart/#direct","text":"name: DevicePart description: A device which function is to be a part of another device that is used within a chemical assay. from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: Device","title":"Direct"},{"location":"DevicePart/#induced","text":"name: DevicePart description: A device which function is to be a part of another device that is used within a chemical assay. from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: Device attributes: has_part: name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part owner: DevicePart domain_of: - Device range: string has_manufacturer: name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer owner: DevicePart domain_of: - Device range: string has_serial_number: name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number owner: DevicePart domain_of: - Device range: string has_model_number: name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number owner: DevicePart domain_of: - Device range: string has_function: name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function owner: DevicePart domain_of: - Device range: string has_setting: name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting owner: DevicePart domain_of: - Device range: string has_visual_representation: name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation owner: DevicePart domain_of: - Device range: string has_type: name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type owner: DevicePart domain_of: - Device - ChemicalAssay range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: DevicePart domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: DevicePart domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: DevicePart domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"Double/","text":"Type: Double A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Double"},{"location":"Double/#type-double","text":"A real number that conforms to the xsd:double specification URI: xsd:double base : float uri : xsd:double","title":"Type: Double"},{"location":"Double/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Double/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Float/","text":"Type: Float A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Float"},{"location":"Float/#type-float","text":"A real number that conforms to the xsd:float specification URI: xsd:float base : float uri : xsd:float","title":"Type: Float"},{"location":"Float/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Float/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Integer/","text":"Type: Integer An integer URI: xsd:integer base : int uri : xsd:integer Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Integer"},{"location":"Integer/#type-integer","text":"An integer URI: xsd:integer base : int uri : xsd:integer","title":"Type: Integer"},{"location":"Integer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Integer/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Jsonpath/","text":"Type: Jsonpath A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Jsonpath"},{"location":"Jsonpath/#type-jsonpath","text":"A string encoding a JSON Path. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to zero or more valid objects within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpath"},{"location":"Jsonpath/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpath/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Jsonpointer/","text":"Type: Jsonpointer A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#type-jsonpointer","text":"A string encoding a JSON Pointer. The value of the string MUST conform to JSON Point syntax and SHOULD dereference to a valid object within the current instance document when encoded in tree form. URI: xsd:string base : str uri : xsd:string repr : str","title":"Type: Jsonpointer"},{"location":"Jsonpointer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Jsonpointer/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"MaterialEntity/","text":"Class: MaterialEntity Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) URI: BFO:0000040 classDiagram class MaterialEntity click MaterialEntity href \"../MaterialEntity\" MinimalMetadataMixin <|-- MaterialEntity click MinimalMetadataMixin href \"../MinimalMetadataMixin\" MaterialEntity <|-- Sample click Sample href \"../Sample\" MaterialEntity <|-- ChemicalEntity click ChemicalEntity href \"../ChemicalEntity\" MaterialEntity <|-- ChemicalSubstance click ChemicalSubstance href \"../ChemicalSubstance\" MaterialEntity <|-- Device click Device href \"../Device\" MaterialEntity : description MaterialEntity : id MaterialEntity : name Inheritance MaterialEntity [ MinimalMetadataMixin ] Sample ChemicalEntity ChemicalSubstance Device Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self BFO:0000040 native michi:MaterialEntity LinkML Source Direct name: MaterialEntity description: Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin class_uri: BFO:0000040 Induced name: MaterialEntity description: Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: MaterialEntity domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: MaterialEntity domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: MaterialEntity domain_of: - MinimalMetadataMixin range: string class_uri: BFO:0000040","title":"Class: MaterialEntity"},{"location":"MaterialEntity/#class-materialentity","text":"Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) URI: BFO:0000040 classDiagram class MaterialEntity click MaterialEntity href \"../MaterialEntity\" MinimalMetadataMixin <|-- MaterialEntity click MinimalMetadataMixin href \"../MinimalMetadataMixin\" MaterialEntity <|-- Sample click Sample href \"../Sample\" MaterialEntity <|-- ChemicalEntity click ChemicalEntity href \"../ChemicalEntity\" MaterialEntity <|-- ChemicalSubstance click ChemicalSubstance href \"../ChemicalSubstance\" MaterialEntity <|-- Device click Device href \"../Device\" MaterialEntity : description MaterialEntity : id MaterialEntity : name","title":"Class: MaterialEntity"},{"location":"MaterialEntity/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] Sample ChemicalEntity ChemicalSubstance Device","title":"Inheritance"},{"location":"MaterialEntity/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"MaterialEntity/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MaterialEntity/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"MaterialEntity/#mappings","text":"Mapping Type Mapped Value self BFO:0000040 native michi:MaterialEntity","title":"Mappings"},{"location":"MaterialEntity/#linkml-source","text":"","title":"LinkML Source"},{"location":"MaterialEntity/#direct","text":"name: MaterialEntity description: Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin class_uri: BFO:0000040","title":"Direct"},{"location":"MaterialEntity/#induced","text":"name: MaterialEntity description: Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time) from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: MaterialEntity domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: MaterialEntity domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: MaterialEntity domain_of: - MinimalMetadataMixin range: string class_uri: BFO:0000040","title":"Induced"},{"location":"MinimalMetadataMixin/","text":"Class: MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema. URI: michi:MinimalMetadataMixin classDiagram class MinimalMetadataMixin click MinimalMetadataMixin href \"../MinimalMetadataMixin\" MinimalMetadataMixin <|-- Dataset click Dataset href \"../Dataset\" MinimalMetadataMixin <|-- MaterialEntity click MaterialEntity href \"../MaterialEntity\" MinimalMetadataMixin <|-- PlannedProcess click PlannedProcess href \"../PlannedProcess\" MinimalMetadataMixin <|-- ChemicalReaction click ChemicalReaction href \"../ChemicalReaction\" MinimalMetadataMixin : description MinimalMetadataMixin : id MinimalMetadataMixin : name Slots Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing direct name 0..1 String A property to provide the human-readable name for a thing direct description 0..1 String A property to provide the human-readable description for a thing direct Mixin Usage mixed into description Dataset Represents a Dataset MaterialEntity Material entities are three-dimensional entities (entities extended in three ... PlannedProcess A process that is executed according to some plan or protocol ChemicalReaction A process between multiple chemical entities of a different kind Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:MinimalMetadataMixin native michi:MinimalMetadataMixin LinkML Source Direct name: MinimalMetadataMixin description: A mixin with the minimal required slots of a class in this schema. from_schema: https://w3id.org/NFDI4Chem/MIChI mixin: true slots: - id - name - description Induced name: MinimalMetadataMixin description: A mixin with the minimal required slots of a class in this schema. from_schema: https://w3id.org/NFDI4Chem/MIChI mixin: true attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: uriorcurie name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: string","title":"Class: MinimalMetadataMixin"},{"location":"MinimalMetadataMixin/#class-minimalmetadatamixin","text":"A mixin with the minimal required slots of a class in this schema. URI: michi:MinimalMetadataMixin classDiagram class MinimalMetadataMixin click MinimalMetadataMixin href \"../MinimalMetadataMixin\" MinimalMetadataMixin <|-- Dataset click Dataset href \"../Dataset\" MinimalMetadataMixin <|-- MaterialEntity click MaterialEntity href \"../MaterialEntity\" MinimalMetadataMixin <|-- PlannedProcess click PlannedProcess href \"../PlannedProcess\" MinimalMetadataMixin <|-- ChemicalReaction click ChemicalReaction href \"../ChemicalReaction\" MinimalMetadataMixin : description MinimalMetadataMixin : id MinimalMetadataMixin : name","title":"Class: MinimalMetadataMixin"},{"location":"MinimalMetadataMixin/#slots","text":"Name Cardinality and Range Description Inheritance id 1 Uriorcurie A property to provide the unique identifier for a thing direct name 0..1 String A property to provide the human-readable name for a thing direct description 0..1 String A property to provide the human-readable description for a thing direct","title":"Slots"},{"location":"MinimalMetadataMixin/#mixin-usage","text":"mixed into description Dataset Represents a Dataset MaterialEntity Material entities are three-dimensional entities (entities extended in three ... PlannedProcess A process that is executed according to some plan or protocol ChemicalReaction A process between multiple chemical entities of a different kind","title":"Mixin Usage"},{"location":"MinimalMetadataMixin/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"MinimalMetadataMixin/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"MinimalMetadataMixin/#mappings","text":"Mapping Type Mapped Value self michi:MinimalMetadataMixin native michi:MinimalMetadataMixin","title":"Mappings"},{"location":"MinimalMetadataMixin/#linkml-source","text":"","title":"LinkML Source"},{"location":"MinimalMetadataMixin/#direct","text":"name: MinimalMetadataMixin description: A mixin with the minimal required slots of a class in this schema. from_schema: https://w3id.org/NFDI4Chem/MIChI mixin: true slots: - id - name - description","title":"Direct"},{"location":"MinimalMetadataMixin/#induced","text":"name: MinimalMetadataMixin description: A mixin with the minimal required slots of a class in this schema. from_schema: https://w3id.org/NFDI4Chem/MIChI mixin: true attributes: id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: uriorcurie name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: MinimalMetadataMixin domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"NFDI4Chem_MIChI/","text":"NFDI4Chem_MIChI This is the LinkML metadata schema prototype for NFDI4Chem URI: https://w3id.org/NFDI4Chem/MIChI","title":"NFDI4Chem_MIChI"},{"location":"NFDI4Chem_MIChI/#nfdi4chem_michi","text":"This is the LinkML metadata schema prototype for NFDI4Chem URI: https://w3id.org/NFDI4Chem/MIChI","title":"NFDI4Chem_MIChI"},{"location":"Ncname/","text":"Type: Ncname Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Ncname"},{"location":"Ncname/#type-ncname","text":"Prefix part of CURIE URI: xsd:string base : NCName uri : xsd:string repr : str","title":"Type: Ncname"},{"location":"Ncname/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Ncname/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Nodeidentifier/","text":"Type: Nodeidentifier A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#type-nodeidentifier","text":"A URI, CURIE or BNODE that represents a node in a model. URI: shex:nonLiteral base : NodeIdentifier uri : shex:nonLiteral repr : str","title":"Type: Nodeidentifier"},{"location":"Nodeidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Nodeidentifier/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Objectidentifier/","text":"Type: Objectidentifier A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str Comments Used for inheritance and type checking Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#type-objectidentifier","text":"A URI or CURIE that represents an object in the model. URI: shex:iri base : ElementIdentifier uri : shex:iri repr : str","title":"Type: Objectidentifier"},{"location":"Objectidentifier/#comments","text":"Used for inheritance and type checking","title":"Comments"},{"location":"Objectidentifier/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Objectidentifier/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"PlannedProcess/","text":"Class: PlannedProcess A process that is executed according to some plan or protocol URI: OBI:0000011 classDiagram class PlannedProcess click PlannedProcess href \"../PlannedProcess\" MinimalMetadataMixin <|-- PlannedProcess click MinimalMetadataMixin href \"../MinimalMetadataMixin\" PlannedProcess <|-- ChemicalAssay click ChemicalAssay href \"../ChemicalAssay\" PlannedProcess <|-- ChemicalAnalysis click ChemicalAnalysis href \"../ChemicalAnalysis\" PlannedProcess <|-- SamplePreparation click SamplePreparation href \"../SamplePreparation\" PlannedProcess : description PlannedProcess : has_input PlannedProcess : has_output PlannedProcess : id PlannedProcess : name Inheritance PlannedProcess [ MinimalMetadataMixin ] ChemicalAssay ChemicalAnalysis SamplePreparation Slots Name Cardinality and Range Description Inheritance has_input 0..1 String A property to provide the input of a process direct has_output 0..1 String A property to provide the output of a proces direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used PlannedProcess has_input domain PlannedProcess PlannedProcess has_output domain PlannedProcess ChemicalAssay has_input domain PlannedProcess ChemicalAssay has_output domain PlannedProcess ChemicalAnalysis has_input domain PlannedProcess ChemicalAnalysis has_output domain PlannedProcess SamplePreparation has_input domain PlannedProcess SamplePreparation has_output domain PlannedProcess Comments PS: unsure if we really need this abstract class or if its children would suffice Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self OBI:0000011 native michi:PlannedProcess LinkML Source Direct name: PlannedProcess description: A process that is executed according to some plan or protocol comments: - 'PS: unsure if we really need this abstract class or if its children would suffice' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin slots: - has_input - has_output class_uri: OBI:0000011 Induced name: PlannedProcess description: A process that is executed according to some plan or protocol comments: - 'PS: unsure if we really need this abstract class or if its children would suffice' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: PlannedProcess domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: PlannedProcess domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: PlannedProcess domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: PlannedProcess domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: PlannedProcess domain_of: - MinimalMetadataMixin range: string class_uri: OBI:0000011","title":"Class: PlannedProcess"},{"location":"PlannedProcess/#class-plannedprocess","text":"A process that is executed according to some plan or protocol URI: OBI:0000011 classDiagram class PlannedProcess click PlannedProcess href \"../PlannedProcess\" MinimalMetadataMixin <|-- PlannedProcess click MinimalMetadataMixin href \"../MinimalMetadataMixin\" PlannedProcess <|-- ChemicalAssay click ChemicalAssay href \"../ChemicalAssay\" PlannedProcess <|-- ChemicalAnalysis click ChemicalAnalysis href \"../ChemicalAnalysis\" PlannedProcess <|-- SamplePreparation click SamplePreparation href \"../SamplePreparation\" PlannedProcess : description PlannedProcess : has_input PlannedProcess : has_output PlannedProcess : id PlannedProcess : name","title":"Class: PlannedProcess"},{"location":"PlannedProcess/#inheritance","text":"PlannedProcess [ MinimalMetadataMixin ] ChemicalAssay ChemicalAnalysis SamplePreparation","title":"Inheritance"},{"location":"PlannedProcess/#slots","text":"Name Cardinality and Range Description Inheritance has_input 0..1 String A property to provide the input of a process direct has_output 0..1 String A property to provide the output of a proces direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"PlannedProcess/#usages","text":"used by used in type used PlannedProcess has_input domain PlannedProcess PlannedProcess has_output domain PlannedProcess ChemicalAssay has_input domain PlannedProcess ChemicalAssay has_output domain PlannedProcess ChemicalAnalysis has_input domain PlannedProcess ChemicalAnalysis has_output domain PlannedProcess SamplePreparation has_input domain PlannedProcess SamplePreparation has_output domain PlannedProcess","title":"Usages"},{"location":"PlannedProcess/#comments","text":"PS: unsure if we really need this abstract class or if its children would suffice","title":"Comments"},{"location":"PlannedProcess/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"PlannedProcess/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"PlannedProcess/#mappings","text":"Mapping Type Mapped Value self OBI:0000011 native michi:PlannedProcess","title":"Mappings"},{"location":"PlannedProcess/#linkml-source","text":"","title":"LinkML Source"},{"location":"PlannedProcess/#direct","text":"name: PlannedProcess description: A process that is executed according to some plan or protocol comments: - 'PS: unsure if we really need this abstract class or if its children would suffice' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin slots: - has_input - has_output class_uri: OBI:0000011","title":"Direct"},{"location":"PlannedProcess/#induced","text":"name: PlannedProcess description: A process that is executed according to some plan or protocol comments: - 'PS: unsure if we really need this abstract class or if its children would suffice' from_schema: https://w3id.org/NFDI4Chem/MIChI mixins: - MinimalMetadataMixin attributes: has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: PlannedProcess domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: PlannedProcess domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: PlannedProcess domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: PlannedProcess domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: PlannedProcess domain_of: - MinimalMetadataMixin range: string class_uri: OBI:0000011","title":"Induced"},{"location":"Protocol/","text":"Class: Protocol The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met URI: OBI:0000272 classDiagram class Protocol click Protocol href \"../Protocol\" Slots Name Cardinality and Range Description Inheritance Comments PS: wasn't discussed in the Halle Metadatathon Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self OBI:0000272 native michi:Protocol LinkML Source Direct name: Protocol description: The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI class_uri: OBI:0000272 Induced name: Protocol description: The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI class_uri: OBI:0000272","title":"Class: Protocol"},{"location":"Protocol/#class-protocol","text":"The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met URI: OBI:0000272 classDiagram class Protocol click Protocol href \"../Protocol\"","title":"Class: Protocol"},{"location":"Protocol/#slots","text":"Name Cardinality and Range Description Inheritance","title":"Slots"},{"location":"Protocol/#comments","text":"PS: wasn't discussed in the Halle Metadatathon","title":"Comments"},{"location":"Protocol/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Protocol/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Protocol/#mappings","text":"Mapping Type Mapped Value self OBI:0000272 native michi:Protocol","title":"Mappings"},{"location":"Protocol/#linkml-source","text":"","title":"LinkML Source"},{"location":"Protocol/#direct","text":"name: Protocol description: The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI class_uri: OBI:0000272","title":"Direct"},{"location":"Protocol/#induced","text":"name: Protocol description: The information that specifies how to execute a planned process, in terms of what steps and actions must be taken and what preconditions must be met comments: - 'PS: wasn''t discussed in the Halle Metadatathon' from_schema: https://w3id.org/NFDI4Chem/MIChI class_uri: OBI:0000272","title":"Induced"},{"location":"Sample/","text":"Class: Sample The material entity that is being evaluated to assay its attributes/characteristic. URI: michi:Sample classDiagram class Sample click Sample href \"../Sample\" MaterialEntity <|-- Sample click MaterialEntity href \"../MaterialEntity\" Sample : description Sample : has_characteristic Sample --> \"0..1\" Characteristic : has_characteristic click Characteristic href \"../Characteristic\" Sample : id Sample : name Sample : output_of_sampling_process Sample --> \"0..1\" SamplePreparation : output_of_sampling_process click SamplePreparation href \"../SamplePreparation\" Inheritance MaterialEntity [ MinimalMetadataMixin ] Sample Slots Name Cardinality and Range Description Inheritance output_of_sampling_process 0..1 SamplePreparation A property to link a sample to its creation process direct has_characteristic 0..1 Characteristic A property to provide a Characteristic of a Material Entity, such as a Sample... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used Sample output_of_sampling_process domain Sample TODOs Review with regard to the ISA model and the controlled/independent & dependent variable part Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:Sample native michi:Sample LinkML Source Direct name: Sample description: The material entity that is being evaluated to assay its attributes/characteristic. todos: - Review with regard to the ISA model and the controlled/independent & dependent variable part from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - output_of_sampling_process - has_characteristic Induced name: Sample description: The material entity that is being evaluated to assay its attributes/characteristic. todos: - Review with regard to the ISA model and the controlled/independent & dependent variable part from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: output_of_sampling_process: name: output_of_sampling_process description: A property to link a sample to its creation process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Sample alias: output_of_sampling_process owner: Sample domain_of: - Sample range: SamplePreparation has_characteristic: name: has_characteristic description: A property to provide a Characteristic of a Material Entity, such as a Sample, or a Process from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_characteristic owner: Sample domain_of: - Sample range: Characteristic id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Sample domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Sample domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Sample domain_of: - MinimalMetadataMixin range: string","title":"Class: Sample"},{"location":"Sample/#class-sample","text":"The material entity that is being evaluated to assay its attributes/characteristic. URI: michi:Sample classDiagram class Sample click Sample href \"../Sample\" MaterialEntity <|-- Sample click MaterialEntity href \"../MaterialEntity\" Sample : description Sample : has_characteristic Sample --> \"0..1\" Characteristic : has_characteristic click Characteristic href \"../Characteristic\" Sample : id Sample : name Sample : output_of_sampling_process Sample --> \"0..1\" SamplePreparation : output_of_sampling_process click SamplePreparation href \"../SamplePreparation\"","title":"Class: Sample"},{"location":"Sample/#inheritance","text":"MaterialEntity [ MinimalMetadataMixin ] Sample","title":"Inheritance"},{"location":"Sample/#slots","text":"Name Cardinality and Range Description Inheritance output_of_sampling_process 0..1 SamplePreparation A property to link a sample to its creation process direct has_characteristic 0..1 Characteristic A property to provide a Characteristic of a Material Entity, such as a Sample... direct id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"Sample/#usages","text":"used by used in type used Sample output_of_sampling_process domain Sample","title":"Usages"},{"location":"Sample/#todos","text":"Review with regard to the ISA model and the controlled/independent & dependent variable part","title":"TODOs"},{"location":"Sample/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"Sample/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"Sample/#mappings","text":"Mapping Type Mapped Value self michi:Sample native michi:Sample","title":"Mappings"},{"location":"Sample/#linkml-source","text":"","title":"LinkML Source"},{"location":"Sample/#direct","text":"name: Sample description: The material entity that is being evaluated to assay its attributes/characteristic. todos: - Review with regard to the ISA model and the controlled/independent & dependent variable part from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity slots: - output_of_sampling_process - has_characteristic","title":"Direct"},{"location":"Sample/#induced","text":"name: Sample description: The material entity that is being evaluated to assay its attributes/characteristic. todos: - Review with regard to the ISA model and the controlled/independent & dependent variable part from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: MaterialEntity attributes: output_of_sampling_process: name: output_of_sampling_process description: A property to link a sample to its creation process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Sample alias: output_of_sampling_process owner: Sample domain_of: - Sample range: SamplePreparation has_characteristic: name: has_characteristic description: A property to provide a Characteristic of a Material Entity, such as a Sample, or a Process from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_characteristic owner: Sample domain_of: - Sample range: Characteristic id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: Sample domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: Sample domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: Sample domain_of: - MinimalMetadataMixin range: string","title":"Induced"},{"location":"SamplePreparation/","text":"Class: SamplePreparation The process in which a sample is being generated or prepared for further analysis URI: michi:SamplePreparation classDiagram class SamplePreparation click SamplePreparation href \"../SamplePreparation\" PlannedProcess <|-- SamplePreparation click PlannedProcess href \"../PlannedProcess\" SamplePreparation : description SamplePreparation : has_input SamplePreparation : has_output SamplePreparation : id SamplePreparation : name Inheritance PlannedProcess [ MinimalMetadataMixin ] SamplePreparation Slots Name Cardinality and Range Description Inheritance has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin Usages used by used in type used Sample output_of_sampling_process range SamplePreparation Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI Mappings Mapping Type Mapped Value self michi:SamplePreparation native michi:SamplePreparation LinkML Source Direct name: SamplePreparation description: The process in which a sample is being generated or prepared for further analysis from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess Induced name: SamplePreparation description: The process in which a sample is being generated or prepared for further analysis from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: SamplePreparation domain_of: - PlannedProcess range: string has_output: name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output owner: SamplePreparation domain_of: - PlannedProcess range: string id: name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id owner: SamplePreparation domain_of: - MinimalMetadataMixin range: uriorcurie required: true name: name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name owner: SamplePreparation domain_of: - MinimalMetadataMixin range: string description: name: description description: A property to provide the human-readable description for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:description alias: description owner: SamplePreparation domain_of: - MinimalMetadataMixin range: string","title":"Class: SamplePreparation"},{"location":"SamplePreparation/#class-samplepreparation","text":"The process in which a sample is being generated or prepared for further analysis URI: michi:SamplePreparation classDiagram class SamplePreparation click SamplePreparation href \"../SamplePreparation\" PlannedProcess <|-- SamplePreparation click PlannedProcess href \"../PlannedProcess\" SamplePreparation : description SamplePreparation : has_input SamplePreparation : has_output SamplePreparation : id SamplePreparation : name","title":"Class: SamplePreparation"},{"location":"SamplePreparation/#inheritance","text":"PlannedProcess [ MinimalMetadataMixin ] SamplePreparation","title":"Inheritance"},{"location":"SamplePreparation/#slots","text":"Name Cardinality and Range Description Inheritance has_input 0..1 String A property to provide the input of a process PlannedProcess has_output 0..1 String A property to provide the output of a proces PlannedProcess id 1 Uriorcurie A property to provide the unique identifier for a thing MinimalMetadataMixin name 0..1 String A property to provide the human-readable name for a thing MinimalMetadataMixin description 0..1 String A property to provide the human-readable description for a thing MinimalMetadataMixin","title":"Slots"},{"location":"SamplePreparation/#usages","text":"used by used in type used Sample output_of_sampling_process range SamplePreparation","title":"Usages"},{"location":"SamplePreparation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"SamplePreparation/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"SamplePreparation/#mappings","text":"Mapping Type Mapped Value self michi:SamplePreparation native michi:SamplePreparation","title":"Mappings"},{"location":"SamplePreparation/#linkml-source","text":"","title":"LinkML Source"},{"location":"SamplePreparation/#direct","text":"name: SamplePreparation description: The process in which a sample is being generated or prepared for further analysis from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess","title":"Direct"},{"location":"SamplePreparation/#induced","text":"name: SamplePreparation description: The process in which a sample is being generated or prepared for further analysis from_schema: https://w3id.org/NFDI4Chem/MIChI is_a: PlannedProcess attributes: has_input: name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input owner: SamplePreparation domain_of: - 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ChemicalAssay range: string","title":"LinkML Source"},{"location":"has_function/","text":"Slot: has_function A property to provide the specific function of a device URI: michi:has_function Applicable Classes Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function domain_of: - Device range: string","title":"Slot: has_function"},{"location":"has_function/#slot-has_function","text":"A property to provide the specific function of a device URI: michi:has_function","title":"Slot: has_function"},{"location":"has_function/#applicable-classes","text":"Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no","title":"Applicable Classes"},{"location":"has_function/#properties","text":"Range: String","title":"Properties"},{"location":"has_function/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_function/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_function/#linkml-source","text":"name: has_function description: A property to provide the specific function of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_function domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_input/","text":"Slot: has_input A property to provide the input of a process. URI: michi:has_input Inheritance has_input has_sample has_device Applicable Classes Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input domain_of: - PlannedProcess range: string","title":"Slot: has_input"},{"location":"has_input/#slot-has_input","text":"A property to provide the input of a process. URI: michi:has_input","title":"Slot: has_input"},{"location":"has_input/#inheritance","text":"has_input has_sample has_device","title":"Inheritance"},{"location":"has_input/#applicable-classes","text":"Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no","title":"Applicable Classes"},{"location":"has_input/#properties","text":"Range: String","title":"Properties"},{"location":"has_input/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_input/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_input/#linkml-source","text":"name: has_input description: A property to provide the input of a process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_input domain_of: - PlannedProcess range: string","title":"LinkML Source"},{"location":"has_manufacturer/","text":"Slot: has_manufacturer A property to provide the vendor of a device URI: michi:has_manufacturer Applicable Classes Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer domain_of: - Device range: string","title":"Slot: has_manufacturer"},{"location":"has_manufacturer/#slot-has_manufacturer","text":"A property to provide the vendor of a device URI: michi:has_manufacturer","title":"Slot: has_manufacturer"},{"location":"has_manufacturer/#applicable-classes","text":"Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no","title":"Applicable Classes"},{"location":"has_manufacturer/#properties","text":"Range: String","title":"Properties"},{"location":"has_manufacturer/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_manufacturer/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_manufacturer/#linkml-source","text":"name: has_manufacturer description: A property to provide the vendor of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_manufacturer domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_model_number/","text":"Slot: has_model_number A property to provide the model number of a device URI: michi:has_model_number Applicable Classes Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number domain_of: - Device range: string","title":"Slot: has_model_number"},{"location":"has_model_number/#slot-has_model_number","text":"A property to provide the model number of a device URI: michi:has_model_number","title":"Slot: has_model_number"},{"location":"has_model_number/#applicable-classes","text":"Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no","title":"Applicable Classes"},{"location":"has_model_number/#properties","text":"Range: String","title":"Properties"},{"location":"has_model_number/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_model_number/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_model_number/#linkml-source","text":"name: has_model_number description: A property to provide the model number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_model_number domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_output/","text":"Slot: has_output A property to provide the output of a proces. URI: michi:has_output Inheritance has_output produces_dataset Applicable Classes Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output domain_of: - PlannedProcess range: string","title":"Slot: has_output"},{"location":"has_output/#slot-has_output","text":"A property to provide the output of a proces. URI: michi:has_output","title":"Slot: has_output"},{"location":"has_output/#inheritance","text":"has_output produces_dataset","title":"Inheritance"},{"location":"has_output/#applicable-classes","text":"Name Description Modifies Slot PlannedProcess A process that is executed according to some plan or protocol no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no","title":"Applicable Classes"},{"location":"has_output/#properties","text":"Range: String","title":"Properties"},{"location":"has_output/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_output/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_output/#linkml-source","text":"name: has_output description: A property to provide the output of a proces. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: PlannedProcess alias: has_output domain_of: - PlannedProcess range: string","title":"LinkML Source"},{"location":"has_part/","text":"Slot: has_part A property to provide the part of a device URI: michi:has_part Applicable Classes Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part domain_of: - Device range: string","title":"Slot: has_part"},{"location":"has_part/#slot-has_part","text":"A property to provide the part of a device URI: michi:has_part","title":"Slot: has_part"},{"location":"has_part/#applicable-classes","text":"Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no","title":"Applicable Classes"},{"location":"has_part/#properties","text":"Range: String","title":"Properties"},{"location":"has_part/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_part/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_part/#linkml-source","text":"name: has_part description: A property to provide the part of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_part domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_quantitative_value/","text":"Slot: has_quantitative_value A property to provide the qualitative value of a characteristic URI: michi:has_quantitative_value Applicable Classes Name Description Modifies Slot Characteristic An attribute/characteristic of an entity (which could be a material entity, i... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_quantitative_value description: A property to provide the qualitative value of a characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: has_quantitative_value domain_of: - Characteristic range: string","title":"Slot: has_quantitative_value"},{"location":"has_quantitative_value/#slot-has_quantitative_value","text":"A property to provide the qualitative value of a characteristic URI: michi:has_quantitative_value","title":"Slot: has_quantitative_value"},{"location":"has_quantitative_value/#applicable-classes","text":"Name Description Modifies Slot Characteristic An attribute/characteristic of an entity (which could be a material entity, i... no","title":"Applicable Classes"},{"location":"has_quantitative_value/#properties","text":"Range: String","title":"Properties"},{"location":"has_quantitative_value/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_quantitative_value/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_quantitative_value/#linkml-source","text":"name: has_quantitative_value description: A property to provide the qualitative value of a characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: has_quantitative_value domain_of: - Characteristic range: string","title":"LinkML Source"},{"location":"has_sample/","text":"Slot: has_sample A property to provide the sample being evaluated in a ChemicalAssay URI: michi:has_sample Inheritance has_input has_sample Applicable Classes Name Description Modifies Slot ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_sample description: A property to provide the sample being evaluated in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_sample domain_of: - ChemicalAssay range: string","title":"Slot: has_sample"},{"location":"has_sample/#slot-has_sample","text":"A property to provide the sample being evaluated in a ChemicalAssay URI: michi:has_sample","title":"Slot: has_sample"},{"location":"has_sample/#inheritance","text":"has_input has_sample","title":"Inheritance"},{"location":"has_sample/#applicable-classes","text":"Name Description Modifies Slot ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no","title":"Applicable Classes"},{"location":"has_sample/#properties","text":"Range: String","title":"Properties"},{"location":"has_sample/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_sample/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_sample/#linkml-source","text":"name: has_sample description: A property to provide the sample being evaluated in a ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_input domain: ChemicalAssay alias: has_sample domain_of: - ChemicalAssay range: string","title":"LinkML Source"},{"location":"has_serial_number/","text":"Slot: has_serial_number A property to provide the serial number of a device URI: michi:has_serial_number Applicable Classes Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number domain_of: - Device range: string","title":"Slot: has_serial_number"},{"location":"has_serial_number/#slot-has_serial_number","text":"A property to provide the serial number of a device URI: michi:has_serial_number","title":"Slot: has_serial_number"},{"location":"has_serial_number/#applicable-classes","text":"Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no","title":"Applicable Classes"},{"location":"has_serial_number/#properties","text":"Range: String","title":"Properties"},{"location":"has_serial_number/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_serial_number/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_serial_number/#linkml-source","text":"name: has_serial_number description: A property to provide the serial number of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_serial_number domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_setting/","text":"Slot: has_setting A property to provide a specific setting of a device URI: michi:has_setting Applicable Classes Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting domain_of: - Device range: string","title":"Slot: has_setting"},{"location":"has_setting/#slot-has_setting","text":"A property to provide a specific setting of a device URI: michi:has_setting","title":"Slot: has_setting"},{"location":"has_setting/#applicable-classes","text":"Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no","title":"Applicable Classes"},{"location":"has_setting/#properties","text":"Range: String","title":"Properties"},{"location":"has_setting/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_setting/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_setting/#linkml-source","text":"name: has_setting description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_setting domain_of: - Device range: string","title":"LinkML Source"},{"location":"has_status/","text":"Slot: has_status A property to provide the status of a ChemicalAnalysis URI: michi:has_status Applicable Classes Name Description Modifies Slot ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no Properties Range: ChemicalAnalysisStatus Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_status description: A property to provide the status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: has_status domain_of: - ChemicalAnalysis range: ChemicalAnalysisStatus","title":"Slot: has_status"},{"location":"has_status/#slot-has_status","text":"A property to provide the status of a ChemicalAnalysis URI: michi:has_status","title":"Slot: has_status"},{"location":"has_status/#applicable-classes","text":"Name Description Modifies Slot ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no","title":"Applicable Classes"},{"location":"has_status/#properties","text":"Range: ChemicalAnalysisStatus","title":"Properties"},{"location":"has_status/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_status/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_status/#linkml-source","text":"name: has_status description: A property to provide the status of a ChemicalAnalysis from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalAnalysis alias: has_status domain_of: - ChemicalAnalysis range: ChemicalAnalysisStatus","title":"LinkML Source"},{"location":"has_type/","text":"Slot: has_type A property to provide the specific type of the class it is used on. URI: michi:has_type Applicable Classes Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no Properties Range: String TODOs Reread the LinkML docs to find out how to implement this properly Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type domain_of: - Device - ChemicalAssay range: string","title":"Slot: has_type"},{"location":"has_type/#slot-has_type","text":"A property to provide the specific type of the class it is used on. URI: michi:has_type","title":"Slot: has_type"},{"location":"has_type/#applicable-classes","text":"Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no","title":"Applicable Classes"},{"location":"has_type/#properties","text":"Range: String","title":"Properties"},{"location":"has_type/#todos","text":"Reread the LinkML docs to find out how to implement this properly","title":"TODOs"},{"location":"has_type/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_type/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_type/#linkml-source","text":"name: has_type description: A property to provide the specific type of the class it is used on. todos: - Reread the LinkML docs to find out how to implement this properly from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 designates_type: true alias: has_type domain_of: - Device - ChemicalAssay range: string","title":"LinkML Source"},{"location":"has_visual_representation/","text":"Slot: has_visual_representation A property to provide a visualization of a device, such as an image, scetch or schematic drawing. 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URI: michi:has_visual_representation","title":"Slot: has_visual_representation"},{"location":"has_visual_representation/#applicable-classes","text":"Name Description Modifies Slot Device A used within an analysis with a specific function no DevicePart A device which function is to be a part of another device that is used within... no","title":"Applicable Classes"},{"location":"has_visual_representation/#properties","text":"Range: String","title":"Properties"},{"location":"has_visual_representation/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"has_visual_representation/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"has_visual_representation/#linkml-source","text":"name: has_visual_representation description: A property to provide a visualization of a device, such as an image, scetch or schematic drawing. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: has_visual_representation domain_of: - Device range: string","title":"LinkML Source"},{"location":"id/","text":"Slot: id A property to provide the unique identifier for a thing URI: dct:identifier Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Dataset Represents a Dataset no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no MaterialEntity Material entities are three-dimensional entities (entities extended in three ... no Device A used within an analysis with a specific function no MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema no Sample The material entity that is being evaluated to assay its attributes/character... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no PlannedProcess A process that is executed according to some plan or protocol no ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no ChemicalReaction A process between multiple chemical entities of a different kind no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no Properties Range: Uriorcurie Required: True Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id domain_of: - MinimalMetadataMixin range: uriorcurie required: true","title":"Slot: id"},{"location":"id/#slot-id","text":"A property to provide the unique identifier for a thing URI: dct:identifier","title":"Slot: id"},{"location":"id/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Dataset Represents a Dataset no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no MaterialEntity Material entities are three-dimensional entities (entities extended in three ... no Device A used within an analysis with a specific function no MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema no Sample The material entity that is being evaluated to assay its attributes/character... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no PlannedProcess A process that is executed according to some plan or protocol no ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no ChemicalReaction A process between multiple chemical entities of a different kind no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no","title":"Applicable Classes"},{"location":"id/#properties","text":"Range: Uriorcurie Required: True","title":"Properties"},{"location":"id/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"id/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"id/#linkml-source","text":"name: id description: A property to provide the unique identifier for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:identifier identifier: true alias: id domain_of: - MinimalMetadataMixin range: uriorcurie required: true","title":"LinkML Source"},{"location":"iupac_name/","text":"Slot: iupac_name A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. URI: michi:iupac_name Applicable Classes Name Description Modifies Slot ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name domain_of: - ChemicalEntity - ChemicalSubstance range: string","title":"Slot: iupac_name"},{"location":"iupac_name/#slot-iupac_name","text":"A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. URI: michi:iupac_name","title":"Slot: iupac_name"},{"location":"iupac_name/#applicable-classes","text":"Name Description Modifies Slot ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no","title":"Applicable Classes"},{"location":"iupac_name/#properties","text":"Range: String","title":"Properties"},{"location":"iupac_name/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"iupac_name/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"iupac_name/#linkml-source","text":"name: iupac_name description: A property to provide the IUPAC name of a Chemical Substance or Chemical Entity. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 alias: iupac_name domain_of: - ChemicalEntity - ChemicalSubstance range: string","title":"LinkML Source"},{"location":"name/","text":"Slot: name A property to provide the human-readable name for a thing URI: dct:title Applicable Classes Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Dataset Represents a Dataset no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no MaterialEntity Material entities are three-dimensional entities (entities extended in three ... no Device A used within an analysis with a specific function no MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema no Sample The material entity that is being evaluated to assay its attributes/character... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no PlannedProcess A process that is executed according to some plan or protocol no ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no ChemicalReaction A process between multiple chemical entities of a different kind no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name domain_of: - MinimalMetadataMixin range: string","title":"Slot: name"},{"location":"name/#slot-name","text":"A property to provide the human-readable name for a thing URI: dct:title","title":"Slot: name"},{"location":"name/#applicable-classes","text":"Name Description Modifies Slot DevicePart A device which function is to be a part of another device that is used within... no Dataset Represents a Dataset no ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no ChemicalAnalysis An interpretation of the data output of a ChemicalAssay no MaterialEntity Material entities are three-dimensional entities (entities extended in three ... no Device A used within an analysis with a specific function no MinimalMetadataMixin A mixin with the minimal required slots of a class in this schema no Sample The material entity that is being evaluated to assay its attributes/character... no SamplePreparation The process in which a sample is being generated or prepared for further anal... no PlannedProcess A process that is executed according to some plan or protocol no ChemicalEntity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, ... no ChemicalReaction A process between multiple chemical entities of a different kind no ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no","title":"Applicable Classes"},{"location":"name/#properties","text":"Range: String","title":"Properties"},{"location":"name/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"name/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"name/#linkml-source","text":"name: name description: A property to provide the human-readable name for a thing from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 slot_uri: dct:title alias: name domain_of: - MinimalMetadataMixin range: string","title":"LinkML Source"},{"location":"output_of_analysis/","text":"Slot: output_of_analysis A property to provide the chemical analysis or assay that determined the characteristic URI: michi:output_of_analysis Applicable Classes Name Description Modifies Slot Characteristic An attribute/characteristic of an entity (which could be a material entity, i... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: output_of_analysis description: A property to provide the chemical analysis or assay that determined the characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: output_of_analysis domain_of: - Characteristic range: string","title":"Slot: output_of_analysis"},{"location":"output_of_analysis/#slot-output_of_analysis","text":"A property to provide the chemical analysis or assay that determined the characteristic URI: michi:output_of_analysis","title":"Slot: output_of_analysis"},{"location":"output_of_analysis/#applicable-classes","text":"Name Description Modifies Slot Characteristic An attribute/characteristic of an entity (which could be a material entity, i... no","title":"Applicable Classes"},{"location":"output_of_analysis/#properties","text":"Range: String","title":"Properties"},{"location":"output_of_analysis/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"output_of_analysis/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"output_of_analysis/#linkml-source","text":"name: output_of_analysis description: A property to provide the chemical analysis or assay that determined the characteristic from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Characteristic alias: output_of_analysis domain_of: - Characteristic range: string","title":"LinkML Source"},{"location":"output_of_sampling_process/","text":"Slot: output_of_sampling_process A property to link a sample to its creation process. URI: michi:output_of_sampling_process Applicable Classes Name Description Modifies Slot Sample The material entity that is being evaluated to assay its attributes/character... no Properties Range: SamplePreparation Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: output_of_sampling_process description: A property to link a sample to its creation process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Sample alias: output_of_sampling_process domain_of: - Sample range: SamplePreparation","title":"Slot: output_of_sampling_process"},{"location":"output_of_sampling_process/#slot-output_of_sampling_process","text":"A property to link a sample to its creation process. URI: michi:output_of_sampling_process","title":"Slot: output_of_sampling_process"},{"location":"output_of_sampling_process/#applicable-classes","text":"Name Description Modifies Slot Sample The material entity that is being evaluated to assay its attributes/character... no","title":"Applicable Classes"},{"location":"output_of_sampling_process/#properties","text":"Range: SamplePreparation","title":"Properties"},{"location":"output_of_sampling_process/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"output_of_sampling_process/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"output_of_sampling_process/#linkml-source","text":"name: output_of_sampling_process description: A property to link a sample to its creation process. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: Sample alias: output_of_sampling_process domain_of: - Sample range: SamplePreparation","title":"LinkML Source"},{"location":"produces_dataset/","text":"Slot: produces_dataset A property to provide the dataset being produced by a ChemicalAnalysis or ChemicalAssay URI: michi:produces_dataset Inheritance has_output produces_dataset Applicable Classes Name Description Modifies Slot ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: produces_dataset description: A property to provide the dataset being produced by a ChemicalAnalysis or ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_output domain: ChemicalAssay alias: produces_dataset domain_of: - ChemicalAssay range: string","title":"Slot: produces_dataset"},{"location":"produces_dataset/#slot-produces_dataset","text":"A property to provide the dataset being produced by a ChemicalAnalysis or ChemicalAssay URI: michi:produces_dataset","title":"Slot: produces_dataset"},{"location":"produces_dataset/#inheritance","text":"has_output produces_dataset","title":"Inheritance"},{"location":"produces_dataset/#applicable-classes","text":"Name Description Modifies Slot ChemicalAssay The planned process to chemically assay a sample in order to determine some c... no","title":"Applicable Classes"},{"location":"produces_dataset/#properties","text":"Range: String","title":"Properties"},{"location":"produces_dataset/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"produces_dataset/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"produces_dataset/#linkml-source","text":"name: produces_dataset description: A property to provide the dataset being produced by a ChemicalAnalysis or ChemicalAssay from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 is_a: has_output domain: ChemicalAssay alias: produces_dataset domain_of: - ChemicalAssay range: string","title":"LinkML Source"},{"location":"provenance/","text":"Slot: provenance A property to provide a specific setting of a device URI: michi:provenance Applicable Classes Name Description Modifies Slot ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: provenance description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: provenance domain_of: - ChemicalSubstance range: string","title":"Slot: provenance"},{"location":"provenance/#slot-provenance","text":"A property to provide a specific setting of a device URI: michi:provenance","title":"Slot: provenance"},{"location":"provenance/#applicable-classes","text":"Name Description Modifies Slot ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no","title":"Applicable Classes"},{"location":"provenance/#properties","text":"Range: String","title":"Properties"},{"location":"provenance/#identifier-and-mapping-information","text":"","title":"Identifier and Mapping Information"},{"location":"provenance/#schema-source","text":"from schema: https://w3id.org/NFDI4Chem/MIChI","title":"Schema Source"},{"location":"provenance/#linkml-source","text":"name: provenance description: A property to provide a specific setting of a device from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: provenance domain_of: - ChemicalSubstance range: string","title":"LinkML Source"},{"location":"space_group/","text":"Slot: space_group A property to provide the space group of a Chemical Substance. URI: michi:space_group Applicable Classes Name Description Modifies Slot ChemicalSubstance A MaterialEntity that is composed of multiple Chemical Entities of either the... no Properties Range: String Identifier and Mapping Information Schema Source from schema: https://w3id.org/NFDI4Chem/MIChI LinkML Source name: space_group description: A property to provide the space group of a Chemical Substance. from_schema: https://w3id.org/NFDI4Chem/MIChI rank: 1000 domain: ChemicalSubstance alias: space_group domain_of: - ChemicalSubstance range: string","title":"Slot: space_group"},{"location":"space_group/#slot-space_group","text":"A property to provide the space group of a Chemical Substance. 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\ No newline at end of file
diff --git a/sitemap.xml b/sitemap.xml
index 5c61e28..282f3b0 100644
--- a/sitemap.xml
+++ b/sitemap.xml
@@ -2,332 +2,332 @@