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display
From https://github.com/JuliaBinaryWrappers/RDKit_jll.jl/releases/download/RDKit-v2022.9.1%2B0/RDKit.v2022.9.1.x86_64-w64-mingw32-cxx11.tar.gz
julia> using ObjectFile julia> readmeta("./librdkitcffi.dll") do oh [s for s in Symbols(oh) if contains(symbol_name(s), r"get_(|q)mol")] end 3-element Vector{COFFSymbolRef{COFFHandle{IOStream}}}: Error showing value of type Vector{COFFSymbolRef{COFFHandle{IOStream}}}: ERROR: SystemError: seek: Bad file descriptor Stacktrace: [1] systemerror(p::String, errno::Int32; extrainfo::Nothing) @ Base ./error.jl:176 [2] #systemerror#80 @ ./error.jl:175 [inlined] [3] systemerror @ ./error.jl:175 [inlined] [4] seek(s::IOStream, n::UInt64) @ Base ./iostream.jl:129 [5] seek(oh::COFFHandle{IOStream}, pos::UInt64) @ ObjectFile ~/.julia/packages/ObjectFile/lbue6/src/Abstract/ObjectHandle.jl:183 [6] strtab_lookup(strtab::COFFStrTab{COFFHandle{IOStream}}, index::UInt64) @ ObjectFile.COFF ~/.julia/packages/ObjectFile/lbue6/src/COFF/COFFStrTab.jl:18 [7] symbol_name @ ~/.julia/packages/ObjectFile/lbue6/src/COFF/COFFSymbol.jl:125 [inlined] [8] show(io::IOContext{IOBuffer}, sym::COFFSymbolRef{COFFHandle{IOStream}}) @ ObjectFile ~/.julia/packages/ObjectFile/lbue6/src/Abstract/Symbol.jl:233 [9] sprint(f::Function, args::COFFSymbolRef{COFFHandle{IOStream}}; context::IOContext{Base.TTY}, sizehint::Int64) @ Base ./strings/io.jl:112 [10] alignment(io::IOContext{Base.TTY}, x::COFFSymbolRef{COFFHandle{IOStream}}) @ Base ./show.jl:2735 [11] alignment(io::IOContext{Base.TTY}, X::AbstractVecOrMat, rows::Vector{Int64}, cols::Vector{Int64}, cols_if_complete::Int64, cols_otherwise::Int64, sep::Int64, ncols::Int64) @ Base ./arrayshow.jl:69 [12] _print_matrix(io::IOContext{Base.TTY}, X::AbstractVecOrMat, pre::String, sep::String, post::String, hdots::String, vdots::String, ddots::String, hmod::Int64, vmod::Int64, rowsA::UnitRange{Int64}, colsA::UnitRange{Int64}) @ Base ./arrayshow.jl:207 [13] print_matrix(io::IOContext{Base.TTY}, X::Vector{COFFSymbolRef{COFFHandle{IOStream}}}, pre::String, sep::String, post::String, hdots::String, vdots::String, ddots::String, hmod::Int64, vmod::Int64) (repeats 2 times) @ Base ./arrayshow.jl:171 [14] print_array @ ./arrayshow.jl:358 [inlined] [15] show(io::IOContext{Base.TTY}, #unused#::MIME{Symbol("text/plain")}, X::Vector{COFFSymbolRef{COFFHandle{IOStream}}}) @ Base ./arrayshow.jl:399 [16] (::REPL.var"#43#44"{REPL.REPLDisplay{REPL.LineEditREPL}, MIME{Symbol("text/plain")}, Base.RefValue{Any}})(io::Any) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:267 [17] with_repl_linfo(f::Any, repl::REPL.LineEditREPL) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:521 [18] display(d::REPL.REPLDisplay, mime::MIME{Symbol("text/plain")}, x::Any) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:260 [19] display(d::REPL.REPLDisplay, x::Any) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:272 [20] display(x::Any) @ Base.Multimedia ./multimedia.jl:328 [21] #invokelatest#2 @ ./essentials.jl:729 [inlined] [22] invokelatest @ ./essentials.jl:726 [inlined] [23] print_response(errio::IO, response::Any, show_value::Bool, have_color::Bool, specialdisplay::Union{Nothing, AbstractDisplay}) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:296 [24] (::REPL.var"#45#46"{REPL.LineEditREPL, Pair{Any, Bool}, Bool, Bool})(io::Any) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:278 [25] with_repl_linfo(f::Any, repl::REPL.LineEditREPL) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:521 [26] print_response(repl::REPL.AbstractREPL, response::Any, show_value::Bool, have_color::Bool) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:276 [27] (::REPL.var"#do_respond#66"{Bool, Bool, REPL.var"#77#87"{REPL.LineEditREPL, REPL.REPLHistoryProvider}, REPL.LineEditREPL, REPL.LineEdit.Prompt})(s::REPL.LineEdit.MIState, buf::Any, ok::Bool) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:857 [28] #invokelatest#2 @ ./essentials.jl:729 [inlined] [29] invokelatest @ ./essentials.jl:726 [inlined] [30] run_interface(terminal::REPL.Terminals.TextTerminal, m::REPL.LineEdit.ModalInterface, s::REPL.LineEdit.MIState) @ REPL.LineEdit ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/LineEdit.jl:2510 [31] run_frontend(repl::REPL.LineEditREPL, backend::REPL.REPLBackendRef) @ REPL ~/.julia/juliaup/julia-1.8.2+0.x64/share/julia/stdlib/v1.8/REPL/src/REPL.jl:1248 [32] (::REPL.var"#49#54"{REPL.LineEditREPL, REPL.REPLBackendRef})() @ REPL ./task.jl:484
This makes it hard to use the readmeta method with the function as first argument (which can be used with the do-block syntax), instead
readmeta
do
julia> using ObjectFile julia> io = open("./librdkitcffi.dll", "r") IOStream(<file ./librdkitcffi.dll>) julia> oh = readmeta(io) COFF Handle (64-bit) julia> [s for s in Symbols(oh) if contains(symbol_name(s), r"get_(|q)mol")] 3-element Vector{COFFSymbolRef{COFFHandle{IOStream}}}: COFF Symbol Name: get_mol Value: 33824 Defined: Yes Strong: Yes Locality: Global COFF Symbol Name: get_qmol Value: 35600 Defined: Yes Strong: Yes Locality: Global COFF Symbol Name: get_molblock Value: 52240 Defined: Yes Strong: Yes Locality: Global julia> close(io)
works, but it requires more manual steps.
The text was updated successfully, but these errors were encountered:
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From https://github.com/JuliaBinaryWrappers/RDKit_jll.jl/releases/download/RDKit-v2022.9.1%2B0/RDKit.v2022.9.1.x86_64-w64-mingw32-cxx11.tar.gz
This makes it hard to use the
readmeta
method with the function as first argument (which can be used with thedo
-block syntax), insteadworks, but it requires more manual steps.
The text was updated successfully, but these errors were encountered: