pyproject.toml

[project]
name = "healthri-metadata"
version = "1.0"
requires-python = ">=3.8"
dependencies = ["rdflib ~= 7.0", "pyshacl ~= 0.26", "pytest ~= 8.2"]

[build-system]
requires = ["hatchling >= 1.19.1"]
build-backend = "hatchling.build"

[tool.pytest.ini_options]
addopts = [
    "--doctest-modules",
    "--ignore=admin",
    "--ignore=devtools",
    "--ignore=rdflib/extras/external_graph_libs.py",
    "--ignore-glob=docs/*.py",
    "--doctest-glob=docs/*.rst",
    "--strict-markers",
]
filterwarnings = [
    # The below warning is a consequence of how pytest doctest detects mocks and how DefinedNamespace behaves when an undefined attribute is being accessed.
    "ignore:Code. pytest_mock_example_attribute_that_shouldnt_exist is not defined in namespace .*:UserWarning",
    # The below warning is a consequence of how pytest detects fixtures and how DefinedNamespace behaves when an undefined attribute is being accessed.
    "ignore:Code. _pytestfixturefunction is not defined in namespace .*:UserWarning",
]

[tool.hatch.build.targets.wheel]
packages = ["tests/"]

[tool.hatch.envs.default.scripts]
test = "pytest {args:tests}"

[tool.hatch.envs.lint]
detached = true
dependencies = ["black>=23.1.0", "ruff>=0.0.243"]


[tool.ruff]
lint.select = [
    "A",
    "ARG",
    "B",
    "C",
    "DTZ",
    "E",
    "EM",
    "F",
    "FBT",
    "I",
    "ICN",
    "ISC",
    "N",
    "PLC",
    "PLE",
    "PLR",
    "PLW",
    "Q",
    "RUF",
    "S",
    "T",
    "TID",
    "UP",
    "W",
    "YTT",
]
target-version = "py38"
line-length = 120
lint.ignore = [
    # Allow non-abstract empty methods in abstract base classes
    "B027",
    # Allow boolean positional values in function calls, like `dict.get(... True)`
    "FBT003",
    # Ignore checks for possible passwords
    "S105",
    "S106",
    "S107",
    # Ignore complexity
    "C901",
    "PLR0911",
    "PLR0912",
    "PLR0913",
    "PLR0915",
]

# Taken from https://github.com/astral-sh/ruff/issues/4368
[tool.ruff.lint.per-file-ignores]
"tests/**/*.py" = [
    # at least this three should be fine in tests:
    "S101", # asserts allowed in tests...
    "ARG",  # Unused function args -> fixtures nevertheless are functionally relevant...
    "FBT",  # Don't care about booleans as positional arguments in tests, e.g. via @pytest.mark.parametrize()
    # The below are debateable
    "PLR2004", # Magic value used in comparison, ...
    "S311",    # Standard pseudo-random generators are not suitable for cryptographic purposes
]