diff --git a/meeting_notes/2025/20250110_telco.md b/meeting_notes/2025/20250110_telco.md new file mode 100644 index 0000000..efc7d74 --- /dev/null +++ b/meeting_notes/2025/20250110_telco.md @@ -0,0 +1,49 @@ +# QC working group teleconference 10 January 2025 + +- Chris Bielow +- Wout Bittremieux +- Nils Hoffmann +- Julian Uszkoreit +- Tim Van Den Bossche +- Mathias Walzer + +--- + +## In-person mzQC meeting + +**January 15–17, 2025** has been selected for the in-person meeting in Antwerp, Belgium. + +Schedule: + +- Tuesday, January 14: Arrival +- Wednesday, January 15: Meeting from 9:00 to 17:00 + - Morning of Day 1: Quick 5-10 min presentations of current use case statuses. + - Day 1 & 2: Hands-on working sessions in small groups. +- Thursday, January 16: Meeting from 9:00 to 17:00 +- Friday, January 17: Meeting from 9:00 to 12:00, followed by lunch and departures + - Final day: Review manuscript progress and brainstorm future directions for the mzQC project. + +Logistics: + +- Wout will send an email with detailed travel, accommodation, and meeting instructions. +- Wout will arrange guest WiFi accounts for participants without Eduroam access. + +## CV term requests + +- Batch correction metrics ([PR 233](https://github.com/HUPO-PSI/mzQC/pull/233)): + - Discussed mismatched metrics in PCA results and quantification data points. + - **Mathias** will investigate and propose fixes for PCA metric mismatches. + - Validator issues with labels and identification-based metrics were reviewed. + +- Harmonization of quartiles/quantiles ([issue 259](https://github.com/HUPO-PSI/mzQC/issues/259)): + - **Wout** will create a PR to transition existing metrics to a quantile-based system for consistency. + - Backward compatibility to be ensured by deprecating quartile terms while introducing quantile terms. + - Consensus to avoid hierarchical relationships; simpler flat categorization preferred. + +**Julian** will finalize CV requests and update descriptions in GitHub. + +## pymzQC + +- Validator error messages need refinement to specify issues, especially with unknown attributes or syntax errors in JSON files. +- Example files updated to resolve outdated attributes like `fileProperties`. +- **Mathias** will review validator-related issues and provide resolutions for error specificity.