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bed_to_parquet_conversion

This is demo, to try it out run:

cargo run samples/well_formed_sample.bed output.parquet

Achievables

  • Binary that converts a .bed with the 3 basic columns {reference_sequence_name, start_position, end_position} to a .parquet.

Integration Tests:

  • Acceptance basic test (troublesome to replicate because of specific parquet.rs objects)

  • Graciously reject badly formed .bed file

  • Graciously reject inexistant .bed file

Error messages

  • Graciously reject badly formed .bed file
  • Graciously reject inexistant .bed file
  • Make acceptable catch all solution and reporting