From f00522403d57073f2587bdc5d3553d566969869a Mon Sep 17 00:00:00 2001 From: "Github Action (publish.yaml)" Date: Tue, 10 Oct 2023 11:24:19 +0000 Subject: [PATCH] Updated requirements.txt files --- requirements_full.txt | 152 ++++++++++++++++++++++++++++++++++++++---- 1 file changed, 138 insertions(+), 14 deletions(-) diff --git a/requirements_full.txt b/requirements_full.txt index ba87a52d..b066b91c 100644 --- a/requirements_full.txt +++ b/requirements_full.txt @@ -1,64 +1,188 @@ +# +# This file is autogenerated by pip-compile with Python 3.11 +# by the following command: +# +# pip-compile --output-file=requirements_full.txt pyproject.toml +# biopython==1.81 + # via mdanalysis certifi==2023.7.22 + # via requests charset-normalizer==3.2.0 + # via requests contourpy==1.1.0 + # via matplotlib cycler==0.11.0 -docopt==0.6.2 + # via matplotlib emmet-core==0.68.0 + # via mp-api fasteners==0.18 + # via mdanalysis fonttools==4.42.1 + # via matplotlib future==0.18.3 -GEMDAT @ file:///home/runner/work/GEMDAT/GEMDAT -GridDataFormats==1.0.1 + # via uncertainties +griddataformats==1.0.1 + # via mdanalysis idna==3.4 + # via requests imageio==2.31.3 + # via scikit-image joblib==1.3.2 + # via + # mdanalysis + # pymatgen kiwisolver==1.4.5 + # via matplotlib latexcodec==2.0.1 -lazy_loader==0.3 + # via pybtex +lazy-loader==0.3 + # via scikit-image markdown-it-py==3.0.0 + # via rich matplotlib==3.7.3 -MDAnalysis==2.6.1 + # via + # GEMDAT (pyproject.toml) + # mdanalysis + # pymatgen +mdanalysis==2.6.1 + # via GEMDAT (pyproject.toml) mdurl==0.1.2 + # via markdown-it-py mmtf-python==1.1.3 + # via mdanalysis monty==2023.9.5 + # via + # emmet-core + # mp-api + # pymatgen mp-api==0.36.1 + # via pymatgen mpmath==1.3.0 + # via sympy mrcfile==1.4.3 + # via griddataformats msgpack==1.0.5 + # via + # mmtf-python + # mp-api networkx==3.1 + # via + # mdanalysis + # pymatgen + # scikit-image numpy==1.25.2 + # via + # GEMDAT (pyproject.toml) + # biopython + # contourpy + # griddataformats + # imageio + # matplotlib + # mdanalysis + # mrcfile + # pandas + # pymatgen + # pywavelets + # scikit-image + # scipy + # spglib + # tifffile packaging==23.1 + # via + # matplotlib + # mdanalysis + # plotly + # scikit-image palettable==3.3.3 + # via pymatgen pandas==2.1.0 -Pillow==10.0.0 -pipreqs==0.4.13 + # via pymatgen +pillow==10.0.0 + # via + # imageio + # matplotlib + # scikit-image plotly==5.16.1 + # via pymatgen pybtex==0.24.0 + # via + # emmet-core + # pymatgen pydantic==1.10.12 -Pygments==2.16.1 + # via emmet-core +pygments==2.16.1 + # via rich pymatgen==2023.9.10 + # via + # GEMDAT (pyproject.toml) + # emmet-core + # mp-api pyparsing==3.1.1 + # via matplotlib python-dateutil==2.8.2 + # via + # matplotlib + # pandas pytz==2023.3.post1 -PyWavelets==1.4.1 -PyYAML==6.0.1 + # via pandas +pywavelets==1.4.1 + # via scikit-image +pyyaml==6.0.1 + # via pybtex requests==2.31.0 + # via + # mp-api + # pymatgen rich==13.5.2 -ruamel.yaml==0.17.32 -ruamel.yaml.clib==0.2.7 + # via GEMDAT (pyproject.toml) +ruamel-yaml==0.17.32 + # via pymatgen +ruamel-yaml-clib==0.2.7 + # via ruamel-yaml scikit-image==0.21.0 + # via GEMDAT (pyproject.toml) scipy==1.11.2 + # via + # GEMDAT (pyproject.toml) + # griddataformats + # mdanalysis + # pymatgen + # scikit-image six==1.16.0 + # via + # latexcodec + # pybtex + # python-dateutil spglib==2.1.0 + # via + # emmet-core + # pymatgen sympy==1.12 + # via pymatgen tabulate==0.9.0 + # via pymatgen tenacity==8.2.3 + # via plotly threadpoolctl==3.2.0 + # via mdanalysis tifffile==2023.8.30 + # via scikit-image tqdm==4.66.1 -typing_extensions==4.7.1 + # via + # mdanalysis + # pymatgen +typing-extensions==4.7.1 + # via + # emmet-core + # mp-api + # pydantic tzdata==2023.3 + # via pandas uncertainties==3.1.7 + # via pymatgen urllib3==2.0.4 -yarg==0.1.9 + # via requests + +# The following packages are considered to be unsafe in a requirements file: +# setuptools