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ontobot committed Feb 13, 2024
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Showing 11 changed files with 1,311 additions and 376 deletions.
164 changes: 133 additions & 31 deletions models/AOP_106.ttl
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213 changes: 178 additions & 35 deletions models/AOP_107.ttl
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192 changes: 159 additions & 33 deletions models/AOP_136.ttl
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239 changes: 186 additions & 53 deletions models/AOP_144.ttl
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165 changes: 90 additions & 75 deletions models/AOP_149.ttl
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63 changes: 33 additions & 30 deletions models/AOP_154.ttl
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185 changes: 162 additions & 23 deletions models/AOP_18.ttl
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8 changes: 4 additions & 4 deletions models/AOP_202.ttl
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Expand Up @@ -14,19 +14,19 @@
<http://geneontology.org/lego/hint/layout/y> "133"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0061505> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-10-31"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2024-02-12"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://www.co-ode.org/ontologies/ont.owl#Translocation%2C%20Genetic> <http://geneontology.org/lego/hint/layout/x> "679"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "138"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://id.nlm.nih.gov/mesh/D014178> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-09-11"^^<http://www.w3.org/2001/XMLSchema#string> .

<https://noctua.apps.renci.org/model/AOP_202> <http://geneontology.org/lego/modelstate> "development"^^<http://www.w3.org/2001/XMLSchema#string> ;
<https://noctua.apps.renci.org/model/AOP_202> <http://geneontology.org/lego/modelstate> "production"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#Ontology> ;
<http://purl.org/dc/elements/1.1/title> "Inhibitor binding to topoisomerase II leading to infant leukaemia"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2023-10-31"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/date> "2024-02-12"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://geneontology.org/lego/hint/layout/x> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

Expand All @@ -38,7 +38,7 @@

<http://purl.org/dc/elements/1.1/date> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

_:t4247 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002327> ;
_:t6101 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002327> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <http://www.co-ode.org/ontologies/ont.owl#DNA%20topoisomerase%20II%20activity> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#Translocation%2C%20Genetic> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
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136 changes: 103 additions & 33 deletions models/AOP_30.ttl
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248 changes: 201 additions & 47 deletions models/AOP_41.ttl
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74 changes: 62 additions & 12 deletions models/AOP_7.ttl
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@@ -1,6 +1,8 @@

<https://noctua.apps.renci.org/model/AOP_7> a <http://www.w3.org/2002/07/owl#Ontology> .

<http://geneontology.org/lego/modelstate> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

<http://purl.obolibrary.org/obo/RO_0002410> a <http://www.w3.org/2002/07/owl#ObjectProperty> .

<http://purl.obolibrary.org/obo/RO_0002327> a <http://www.w3.org/2002/07/owl#ObjectProperty> .
Expand All @@ -23,17 +25,19 @@

<http://purl.obolibrary.org/obo/GO_0006703> a <http://www.w3.org/2002/07/owl#Class> .

<http://www.co-ode.org/ontologies/ont.owl#17beta-estradiol> <http://purl.obolibrary.org/obo/RO_0002327> <http://www.co-ode.org/ontologies/ont.owl#ovulation%20cycle> ;
<http://purl.obolibrary.org/obo/RO_0002331> <http://www.co-ode.org/ontologies/ont.owl#ovulation%20cycle> ;
<http://purl.obolibrary.org/obo/RO_0002353> <http://www.co-ode.org/ontologies/ont.owl#estrogen%20biosynthetic%20process> , <http://www.co-ode.org/ontologies/ont.owl#ovulation%20cycle> ;
<http://purl.obolibrary.org/obo/RO_0002428> <http://www.co-ode.org/ontologies/ont.owl#ovulation%20cycle> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/CHEBI_16469> .
<http://www.co-ode.org/ontologies/ont.owl#17beta-estradiol> <http://purl.obolibrary.org/obo/RO_0002428> <http://www.co-ode.org/ontologies/ont.owl#ovulation%20cycle> ;
<http://geneontology.org/lego/hint/layout/x> "797"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "634.25"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/CHEBI_16469> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2024-01-31"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://www.co-ode.org/ontologies/ont.owl#estrogen%20biosynthetic%20process> <http://purl.obolibrary.org/obo/RO_0000057> <http://www.co-ode.org/ontologies/ont.owl#17beta-estradiol> ;
<http://purl.obolibrary.org/obo/RO_0002233> <http://www.co-ode.org/ontologies/ont.owl#17beta-estradiol> ;
<http://purl.obolibrary.org/obo/RO_0002234> <http://www.co-ode.org/ontologies/ont.owl#17beta-estradiol> ;
<http://purl.obolibrary.org/obo/RO_0002332> <http://www.co-ode.org/ontologies/ont.owl#17beta-estradiol> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0006703> .
<http://www.co-ode.org/ontologies/ont.owl#estrogen%20biosynthetic%20process> <http://purl.obolibrary.org/obo/RO_0002234> <http://www.co-ode.org/ontologies/ont.owl#17beta-estradiol> ;
<http://geneontology.org/lego/hint/layout/x> "473"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "652.5"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0006703> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2024-01-31"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://id.nlm.nih.gov/mesh/D005298> a <http://www.w3.org/2002/07/owl#Class> .

Expand All @@ -45,8 +49,54 @@

<http://purl.obolibrary.org/obo/GO_0042698> a <http://www.w3.org/2002/07/owl#Class> .

<http://www.co-ode.org/ontologies/ont.owl#ovulation%20cycle> a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0042698> .
<http://www.co-ode.org/ontologies/ont.owl#ovulation%20cycle> <http://geneontology.org/lego/hint/layout/x> "785"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "502"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0042698> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2024-01-31"^^<http://www.w3.org/2001/XMLSchema#string> .

<https://noctua.apps.renci.org/model/AOP_7> <http://geneontology.org/lego/modelstate> "review"^^<http://www.w3.org/2001/XMLSchema#string> ;
a <http://www.w3.org/2002/07/owl#Ontology> ;
<http://purl.org/dc/elements/1.1/title> "Aromatase (Cyp19a1) reduction leading to impaired fertility in adult female"^^<http://www.w3.org/2001/XMLSchema#string> .
<http://purl.org/dc/elements/1.1/title> "Aromatase (Cyp19a1) reduction leading to impaired fertility in adult female"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2024-01-31"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://geneontology.org/lego/hint/layout/x> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

<http://geneontology.org/lego/hint/layout/y> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

<http://purl.obolibrary.org/obo/RO_0002213> a <http://www.w3.org/2002/07/owl#ObjectProperty> .

<https://noctua.apps.renci.org/model/AOP_7/64ecbbe400000033> <http://geneontology.org/lego/hint/layout/x> "372"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "800"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.obolibrary.org/obo/RO_0002213> <http://www.co-ode.org/ontologies/ont.owl#estrogen%20biosynthetic%20process> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0070330> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2024-01-31"^^<http://www.w3.org/2001/XMLSchema#string> .

<https://noctua.apps.renci.org/model/AOP_7/64ecbbe400000034> <http://geneontology.org/lego/hint/layout/x> "362"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://geneontology.org/lego/hint/layout/y> "516"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.obolibrary.org/obo/RO_0002213> <http://www.co-ode.org/ontologies/ont.owl#estrogen%20biosynthetic%20process> ;
a <http://www.w3.org/2002/07/owl#NamedIndividual> , <http://purl.obolibrary.org/obo/GO_0009299> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2024-01-31"^^<http://www.w3.org/2001/XMLSchema#string> .

<http://purl.org/dc/elements/1.1/title> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

<http://purl.org/dc/elements/1.1/contributor> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

<http://purl.org/dc/elements/1.1/date> a <http://www.w3.org/2002/07/owl#AnnotationProperty> .

_:t5742 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002213> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <https://noctua.apps.renci.org/model/AOP_7/64ecbbe400000033> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#estrogen%20biosynthetic%20process> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2024-01-31"^^<http://www.w3.org/2001/XMLSchema#string> .

_:t5743 <http://www.w3.org/2002/07/owl#annotatedProperty> <http://purl.obolibrary.org/obo/RO_0002213> ;
<http://www.w3.org/2002/07/owl#annotatedSource> <https://noctua.apps.renci.org/model/AOP_7/64ecbbe400000034> ;
<http://www.w3.org/2002/07/owl#annotatedTarget> <http://www.co-ode.org/ontologies/ont.owl#estrogen%20biosynthetic%20process> ;
a <http://www.w3.org/2002/07/owl#Axiom> ;
<http://purl.org/dc/elements/1.1/contributor> "https://orcid.org/0000-0001-9356-3475"^^<http://www.w3.org/2001/XMLSchema#string> ;
<http://purl.org/dc/elements/1.1/date> "2024-01-31"^^<http://www.w3.org/2001/XMLSchema#string> .

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