study.xml

<?xml version='1.0' encoding='UTF-8'?>
<STUDY_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="ftp://ftp.sra.ebi.ac.uk/meta/xsd/sra_1_5/SRA.study.xsd">
  <STUDY alias="TODO: Submitter designated name for the 'Study'. The name must be unique within the submission account." center_name="TODO: The center name (its acronym) of the submitter's account" broker_name="TODO: The center name (its acronym) of the broker if applicable, if not, remove this attribute (broker_name)">
    <DESCRIPTOR>
      <STUDY_TITLE>TODO: Title of the study as would be used in a publication</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="TODO: Overall purpose of the study. Must be value from the Controlled vocabulary:
            'Whole Genome Sequencing',
            'Metagenomics',
            'Transcriptome Analysis',
            'Resequencing',
            'Epigenetics',
            'Synthetic Genomics',
            'Forensic or Paleo-genomics',
            'Gene Regulation Study',
            'Cancer Genomics',
            'Population Genomics',
            'RNASeq',
            'Exome Sequencing',
            'Pooled Clone Sequencing',
            'Transcriptome Sequencing',
            'Other' (Study type not listed)" new_study_type="TODO: In case the overall purpose of the Study cannot be found in the existing types list, you may propose a new term. To do so, you shall use 'Other' as existing_study_type, and enter here a new study type. Otherwise, remove this attribute (new_study_type)"/>
      <STUDY_ABSTRACT>TODO: Study abstract as it could appear in a publication. Briefly describes the goals, purpose, and scope of the Study. This does not need to be listed if it can be inherited from a referenced publication.</STUDY_ABSTRACT>    <!-- Optional block -->
      <CENTER_PROJECT_NAME>TODO: Submitter defined project name. This field is intended for backward tracking of the study record to the submitter's LIMS.</CENTER_PROJECT_NAME>    <!-- Optional block -->
      <RELATED_STUDIES>   <!-- Optional block -->
        <RELATED_STUDY>
          <RELATED_LINK>
            <DB>TODO: Database of the related study. This value has to match with the NCBI controlled vocabulary of permitted cross references (see list: http://www.ncbi.nlm.nih.gov/entrez/eutils/einfo.fcgi?)"</DB>
            <ID>TODO: Numeric record ID of the related Study, meaningful to the NCBI Entrez system"</ID>
            <LABEL>TODO: How to label the link to the related Study"</LABEL>
          </RELATED_LINK>
          <IS_PRIMARY>TODO: Whether this study object is designated as the primary source of the study or project information (use "true" or "false")"</IS_PRIMARY>
        </RELATED_STUDY>
        <!-- If you want to provide several related studies, repeat the <RELATED_STUDY> block here as many times as needed. -->
      </RELATED_STUDIES>
      <STUDY_DESCRIPTION>TODO: More extensive free-form description of the study</STUDY_DESCRIPTION>    <!-- Optional block -->
    </DESCRIPTOR>
    <STUDY_ATTRIBUTES>    <!-- Optional block -->
      <STUDY_ATTRIBUTE>
        <TAG>TODO: Name of the custom attribute.</TAG>
        <VALUE>TODO: Value of the custom attribute.</VALUE>
        <UNITS>TODO: Optional scientific units.</UNITS>
      </STUDY_ATTRIBUTE>
      <!-- If you want to provide several custom study attributes, repeat <STUDY_ATTRIBUTE> (with at least TAG and VALUE) here as many times as needed. -->
    </STUDY_ATTRIBUTES>
  </STUDY>
  <!--  If you are submitting more than one Study, replicate the block <STUDY> here, 
        as many times as necessary.  -->
</STUDY_SET>