From 77cabdca465522b3215a45a4dcf8cdb8498f2b30 Mon Sep 17 00:00:00 2001 From: lschriml Date: Wed, 20 May 2020 17:02:13 -0400 Subject: [PATCH] updated EQ removed from syndrome --- src/ontology/doid-edit.owl | 14 ++++++++------ 1 file changed, 8 insertions(+), 6 deletions(-) diff --git a/src/ontology/doid-edit.owl b/src/ontology/doid-edit.owl index da77d8978..e3a567cb7 100644 --- a/src/ontology/doid-edit.owl +++ b/src/ontology/doid-edit.owl @@ -23294,6 +23294,7 @@ AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_0050813 "disease_ontology" AnnotationAssertion(oboInOwl:id obo:DOID_0050813 "DOID:0050813"^^xsd:string) AnnotationAssertion(rdfs:label obo:DOID_0050813 "spondyloepiphyseal dysplasia with congenital joint dislocations"^^xsd:string) SubClassOf(obo:DOID_0050813 obo:DOID_0080027) +SubClassOf(obo:DOID_0050813 ObjectSomeValuesFrom(obo:RO_0001025 obo:UBERON_0000982)) # Class: obo:DOID_0050814 (temtamy preaxial brachydactyly syndrome) @@ -26019,8 +26020,8 @@ AnnotationAssertion(Annotation(dc:type obo:ECO_0007646) Annotation(oboInOwl:hasD AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_0060039 "disease_ontology"^^xsd:string) AnnotationAssertion(oboInOwl:id obo:DOID_0060039 "DOID:0060039"^^xsd:string) AnnotationAssertion(rdfs:label obo:DOID_0060039 "autoimmune disease of skin and connective tissue"^^xsd:string) +EquivalentClasses(obo:DOID_0060039 ObjectIntersectionOf(obo:DOID_417 ObjectSomeValuesFrom(obo:RO_0001025 ObjectIntersectionOf(obo:UBERON_0000014 obo:UBERON_0002384)))) SubClassOf(obo:DOID_0060039 obo:DOID_417) -SubClassOf(obo:DOID_0060039 ObjectSomeValuesFrom(obo:RO_0001025 ObjectIntersectionOf(obo:UBERON_0000014 obo:UBERON_0002384))) # Class: obo:DOID_0060040 (pervasive developmental disorder) @@ -42272,7 +42273,6 @@ AnnotationAssertion(oboInOwl:inSubset obo:DOID_0080014 doid:DO_GXD_slim) AnnotationAssertion(oboInOwl:inSubset obo:DOID_0080014 doid:DO_MGI_slim) AnnotationAssertion(rdfs:label obo:DOID_0080014 "chromosomal disease"^^xsd:string) SubClassOf(obo:DOID_0080014 obo:DOID_630) -SubClassOf(obo:DOID_0080014 ObjectSomeValuesFrom(obo:RO_0004019 obo:SO_0000240)) # Class: obo:DOID_0080015 (physical disorder) @@ -115906,6 +115906,7 @@ AnnotationAssertion(oboInOwl:inSubset obo:DOID_225 doid:DO_GXD_slim) AnnotationAssertion(oboInOwl:inSubset obo:DOID_225 doid:DO_MGI_slim) AnnotationAssertion(oboInOwl:inSubset obo:DOID_225 doid:NCIthesaurus) AnnotationAssertion(rdfs:label obo:DOID_225 "syndrome"^^xsd:string) +EquivalentClasses(obo:DOID_225 ObjectIntersectionOf(obo:DOID_4 ObjectSomeValuesFrom(obo:RO_0004019 obo:SYMP_0000462))) SubClassOf(obo:DOID_225 obo:DOID_4) # Class: obo:DOID_2251 (hypertrophic elongation of cervix) @@ -121936,7 +121937,6 @@ AnnotationAssertion(oboInOwl:inSubset obo:DOID_2914 doid:DO_FlyBase_slim) AnnotationAssertion(oboInOwl:inSubset obo:DOID_2914 doid:DO_GXD_slim) AnnotationAssertion(oboInOwl:inSubset obo:DOID_2914 doid:DO_MGI_slim) AnnotationAssertion(rdfs:label obo:DOID_2914 "immune system disease"^^xsd:string) -EquivalentClasses(obo:DOID_2914 ObjectIntersectionOf(obo:DOID_4 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0002715))) SubClassOf(obo:DOID_2914 obo:DOID_7) # Class: obo:DOID_2916 (hypersensitivity reaction type IV disease) @@ -134265,8 +134265,8 @@ AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_417 "disease_ontology"^^xs AnnotationAssertion(oboInOwl:id obo:DOID_417 "DOID:417"^^xsd:string) AnnotationAssertion(rdfs:comment obo:DOID_417 "Xref MGI."^^xsd:string) AnnotationAssertion(rdfs:label obo:DOID_417 "autoimmune hypersensitivity disease"^^xsd:string) -EquivalentClasses(obo:DOID_417 ObjectIntersectionOf(obo:DOID_2914 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0010701))) SubClassOf(obo:DOID_417 obo:DOID_0060056) +SubClassOf(obo:DOID_417 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0010701)) # Class: obo:DOID_4170 (obsolete localized resectable neuroblastoma) @@ -149624,6 +149624,7 @@ AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_5748 "disease_ontology"^^x AnnotationAssertion(oboInOwl:id obo:DOID_5748 "DOID:5748"^^xsd:string) AnnotationAssertion(rdfs:label obo:DOID_5748 "rheumatic pulmonary valve disease"^^xsd:string) SubClassOf(obo:DOID_5748 obo:DOID_5749) +SubClassOf(obo:DOID_5748 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0010701)) # Class: obo:DOID_5749 (pulmonary valve disease) @@ -153717,7 +153718,6 @@ AnnotationAssertion(oboInOwl:hasOBONamespace obo:DOID_630 "disease_ontology"^^xs AnnotationAssertion(oboInOwl:id obo:DOID_630 "DOID:630"^^xsd:string) AnnotationAssertion(oboInOwl:inSubset obo:DOID_630 doid:NCIthesaurus) AnnotationAssertion(rdfs:label obo:DOID_630 "genetic disease"^^xsd:string) -EquivalentClasses(obo:DOID_630 ObjectIntersectionOf(obo:DOID_4 ObjectSomeValuesFrom(obo:RO_0004019 obo:SO_0001537))) SubClassOf(obo:DOID_630 obo:DOID_4) # Class: obo:DOID_6301 (obsolete prostate basal cell carcinoma) @@ -156711,6 +156711,8 @@ AnnotationAssertion(oboInOwl:inSubset obo:DOID_676 doid:NCIthesaurus) AnnotationAssertion(rdfs:comment obo:DOID_676 "Xref MGI."^^xsd:string) AnnotationAssertion(rdfs:label obo:DOID_676 "juvenile rheumatoid arthritis"^^xsd:string) SubClassOf(obo:DOID_676 obo:DOID_7148) +SubClassOf(obo:DOID_676 ObjectSomeValuesFrom(obo:RO_0001025 obo:UBERON_0000982)) +SubClassOf(obo:DOID_676 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0010701)) # Class: obo:DOID_6760 (lung lymphoma) @@ -159269,8 +159271,8 @@ AnnotationAssertion(oboInOwl:inSubset obo:DOID_7148 doid:NCIthesaurus) AnnotationAssertion(rdfs:comment obo:DOID_7148 "OMIM mapping confirmed by DO. [SN]."^^xsd:string) AnnotationAssertion(rdfs:label obo:DOID_7148 "rheumatoid arthritis"^^xsd:string) SubClassOf(obo:DOID_7148 obo:DOID_848) +SubClassOf(obo:DOID_7148 ObjectSomeValuesFrom(obo:RO_0001025 obo:UBERON_0000982)) SubClassOf(obo:DOID_7148 ObjectSomeValuesFrom(obo:RO_0002200 obo:HP_0010701)) -SubClassOf(obo:DOID_7148 ObjectSomeValuesFrom(doid:has_symptom obo:SYMP_0019169)) # Class: obo:DOID_7149 (obsolete metastatic parathyroid cancer)