From 3dfa9eb5dc4c7b44a4853ffd7ac6b4a11fa87f78 Mon Sep 17 00:00:00 2001
From: CindyvdVries <cindyvdvries@gmail.com>
Date: Tue, 1 Oct 2024 15:52:42 +0200
Subject: [PATCH 1/2] update manual and input file

---
 docs/manual/rules/axis_filter_rule.md |  5 ++--
 template_input.yaml                   | 39 ++++++++++++++++++++++-----
 2 files changed, 35 insertions(+), 9 deletions(-)

diff --git a/docs/manual/rules/axis_filter_rule.md b/docs/manual/rules/axis_filter_rule.md
index 66af08ea..504c5714 100644
--- a/docs/manual/rules/axis_filter_rule.md
+++ b/docs/manual/rules/axis_filter_rule.md
@@ -5,11 +5,10 @@ FORMAT
 - axis_filter_rule:
       name: <name_of_rule_in_text>
       description: <description_of_rule_in_text>
-      layer_number: <integer_nr_of_layer>
-	  axis_name: <name_of_axis_applied>
+      axis_name: <name_of_axis_applied>
       layer_number: <integer_nr_of_layer_in_axis_applied>
       input_variable: <one_3D_input_variable_name>
-      output_variable: <one_output_variable_name>
+      output_variable: <one_output_variable_name> 
 ```
 
 The axis filter rule is close to the layer_filter_rule, however it allows for filtering on any axis present in the data. This allows for the selection of a specific time step, spatial cell or other data axis value.
diff --git a/template_input.yaml b/template_input.yaml
index e00df928..ab87a20d 100644
--- a/template_input.yaml
+++ b/template_input.yaml
@@ -54,13 +54,40 @@ rules:
         operation: 
         input_variables: [,]
         output_variable: 
+ 
+  - formula_rule:
+      name: 
+      description:
+      formula:
+      input_variables: [,]
+      output_variable:
 
-  - combine_results_rule:
-        name: 
-        description:     
-        formula: 
-        input_variables: [,]
-        output_variable: 
+  - rolling_statistics_rule:
+      name: 
+      description: 
+      operation: 
+      time_scale :
+      period:
+      input_variable:
+      output_variable:
+
+  - classification_rule:
+      name:
+      description:
+      criteria_table:
+            - [ "output",]
+            - [,]
+            - [,]
+      input_variables: []
+      output_variable: 
+
+  - axis_filter_rule:
+      name:
+      description:
+      axis_name:
+      layer_number: 
+      input_variable:
+      output_variable: 
 
   - depth_average_rule:
         name: 

From eac10c5b9b381a8a37291695a525f1866ced94ee Mon Sep 17 00:00:00 2001
From: CindyvdVries <cindyvdvries@gmail.com>
Date: Tue, 1 Oct 2024 16:00:14 +0200
Subject: [PATCH 2/2] remove all trailing spaces

---
 template_input.yaml | 85 ++++++++++++++++++++++-----------------------
 1 file changed, 42 insertions(+), 43 deletions(-)

diff --git a/template_input.yaml b/template_input.yaml
index ab87a20d..3337586a 100644
--- a/template_input.yaml
+++ b/template_input.yaml
@@ -2,70 +2,70 @@ version: 0.5.13
 
 input-data:
   - dataset:
-      filename: 
-      start_date: 
-      end_date: 
+      filename:
+      start_date:
+      end_date:
       variable_mapping:
 
 rules:
   - multiply_rule:
-      name: 
-      description: 
+      name:
+      description:
       multipliers: []
-      input_variable: 
-      output_variable: 
+      input_variable:
+      output_variable:
 
   - layer_filter_rule:
-      name: 
-      description: 
-      layer_number: 
-      input_variable: 
-      output_variable: 
-      
+      name:
+      description:
+      layer_number:
+      input_variable:
+      output_variable:
+
   - time_aggregation_rule:
-      name: 
-      description: 
-      operation: 
-      time_scale: 
-      input_variable: 
-      output_variable: 
+      name:
+      description:
+      operation:
+      time_scale:
+      input_variable:
+      output_variable:
 
     - step_function_rule:
-      name: 
-      description: 
+      name:
+      description:
       limit_response_table:
             - [ limit, response]
             - [,]
-      input_variable:       
-      output_variable: 
+      input_variable:
+      output_variable:
 
   - response_curve_rule:
-      name: 
-      description: 
+      name:
+      description:
       response_table:
           - [  input,  output ]
           - [,]
-      input_variable:        
-      output_variable: 
+      input_variable:
+      output_variable:
 
   - combine_results_rule:
-        name: 
-        description:      
-        operation: 
+        name:
+        description:
+        operation:
         input_variables: [,]
-        output_variable: 
- 
+        output_variable:
+
   - formula_rule:
-      name: 
+      name:
       description:
       formula:
       input_variables: [,]
       output_variable:
 
   - rolling_statistics_rule:
-      name: 
-      description: 
-      operation: 
+      name:
+      description:
+      operation:
       time_scale :
       period:
       input_variable:
@@ -79,26 +79,25 @@ rules:
             - [,]
             - [,]
       input_variables: []
-      output_variable: 
+      output_variable:
 
   - axis_filter_rule:
       name:
       description:
       axis_name:
-      layer_number: 
+      layer_number:
       input_variable:
-      output_variable: 
+      output_variable:
 
   - depth_average_rule:
-        name: 
+        name:
         description:
         input_variable:
-        output_variable: 
+        output_variable:
 
   - filter_extremes_rule:
       name:
       description:
-      input_variable:
       output_variable:
       extreme_type:
       distance:
@@ -106,4 +105,4 @@ rules:
       mask: True
 
 output-data:
-  filename: 
+  filename: