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Automate delivery of QC report for microSALT cases with Data delivery=fastq_qc #4071

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beatrizsavinhas opened this issue Jan 10, 2025 · 0 comments
Open
2 tasks

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@beatrizsavinhas
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beatrizsavinhas commented Jan 10, 2025

As a production user,
I want the required QC report to be automatically delivered to Caesar for cases with Data delivery=fastq_qc,
So that automated deliveries can happen.

Work impact

Answer the following questions:

  • Is there currently a workaround for this issue? If so, what is it?
    • No. QC reports are only manually sent through Freshdesk at the moment.
  • How much time would be saved by implementing this feature on a weekly basis?
    • Not applicable. The data delivery type should include this but it currently doesn't.
  • How many users are affected by this issue?
    • Production and customers.
  • Are customers affected by this issue?
    • Yes.

Acceptance Criteria

  • For microsalt cases with Data delivery=fastq_qc, automatically send QC report to caesar
    • it should be sent to /inbox/customer/ticket

Notes

Closes https://github.com/Clinical-Genomics/project-Automatic-Delivery/issues/2

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