diff --git a/workflow/rules/qc.smk b/workflow/rules/qc.smk index d71748b..9034563 100644 --- a/workflow/rules/qc.smk +++ b/workflow/rules/qc.smk @@ -289,8 +289,8 @@ rule multiqc: expand(join(QCDIR,"tss","{replicate}.tss.txt"),replicate=REPLICATES), expand(join(RESULTSDIR,"peaks","macs2","{sample}.consensus.macs2.peakfiles"),sample=SAMPLES), expand(join(RESULTSDIR,"peaks","genrich","{sample}.consensus.genrich.peakfiles"),sample=SAMPLES), - expand(join(QCDIR,"FQscreen","{replicate}.R1.noBL_screen.txt"),sample=REPLICATES), - expand(join(QCDIR,"FQscreen","{replicate}.R2.noBL_screen.txt"),sample=REPLICATES), + expand(join(QCDIR,"FQscreen","{replicate}.R1.noBL_screen.txt"),replicate=REPLICATES), + expand(join(QCDIR,"FQscreen","{replicate}.R2.noBL_screen.txt"),replicate=REPLICATES), output: join(RESULTSDIR,"QC","multiqc_report.html"), join(RESULTSDIR,"QC","QCStats.tsv")