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base.yml
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base.yml
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name: fengsicheng
channels:
- conda-forge
- bioconda
- defaults
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/pytorch/linux-64/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/pytorch/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/r/
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- bzip2=1.0.8=hd590300_5
- ca-certificates=2024.6.2=hbcca054_0
- ld_impl_linux-64=2.40=h55db66e_0
- libffi=3.4.4=h6a678d5_1
- libgcc-ng=13.2.0=h77fa898_7
- libgomp=13.2.0=h77fa898_7
- libnsl=2.0.1=hd590300_0
- libsqlite=3.45.3=h2797004_0
- libstdcxx-ng=13.2.0=hc0a3c3a_7
- libuuid=2.38.1=h0b41bf4_0
- libxcrypt=4.4.36=hd590300_1
- libzlib=1.2.13=hd590300_5
- ncurses=6.5=h59595ed_0
- openssl=3.3.1=h4ab18f5_0
- packaging=24.1=pyhd8ed1ab_0
- python=3.9.19=h0755675_0_cpython
- readline=8.2=h8228510_1
- tk=8.6.13=noxft_h4845f30_101
- wheel=0.43.0=pyhd8ed1ab_1
- xz=5.4.6=h5eee18b_1
- pip:
- absl-py==2.1.0
- aiohttp==3.9.5
- aiosignal==1.3.1
- anndata==0.10.7
- array-api-compat==1.6
- async-timeout==4.0.3
- attrs==23.2.0
- cached-property==1.5.2
- cell-gears==0.0.2
- certifi==2022.12.7
- charset-normalizer==2.1.1
- chex==0.1.86
- click==8.1.7
- contextlib2==21.6.0
- contourpy==1.2.1
- cycler==0.12.1
- datasets==2.19.1
- dcor==0.6
- deprecated==1.2.14
- dill==0.3.8
- docker-pycreds==0.4.0
- docrep==0.3.2
- einops==0.8.0
- et-xmlfile==1.1.0
- etils==1.5.2
- exceptiongroup==1.2.2
- faiss-gpu==1.7.2
- filelock==3.13.1
- flax==0.8.3
- fonttools==4.51.0
- frozenlist==1.4.1
- fsspec==2024.2.0
- get-annotations==0.1.2
- gitdb==4.0.11
- gitpython==3.1.43
- h5py==3.11.0
- huggingface-hub==0.23.1
- idna==3.4
- igraph==0.11.5
- importlib-resources==6.4.0
- jax==0.4.28
- jaxlib==0.4.28
- jinja2==3.1.3
- joblib==1.4.2
- kiwisolver==1.4.5
- legacy-api-wrap==1.4
- leidenalg==0.10.2
- lightning-utilities==0.11.2
- llvmlite==0.42.0
- local-attention==1.9.1
- markdown-it-py==3.0.0
- markupsafe==2.1.5
- matplotlib==3.9.0
- mdurl==0.1.2
- ml-collections==0.1.1
- ml-dtypes==0.4.0
- mpmath==1.3.0
- msgpack==1.0.8
- mudata==0.2.3
- multidict==6.0.5
- multipledispatch==1.0.0
- multiprocess==0.70.16
- natsort==8.4.0
- networkx==3.2.1
- ninja==1.11.1.1
- numba==0.59.1
- numpy==1.26.3
- numpyro==0.15.0
- openpyxl==3.1.2
- opt-einsum==3.3.0
- optax==0.2.2
- orbax==0.1.7
- orbax-checkpoint==0.5.11
- pandas==2.2.2
- patsy==0.5.6
- pillow==10.2.0
- pip==24.2
- plotly==5.22.0
- protobuf==5.26.1
- pyarrow==16.1.0
- pyarrow-hotfix==0.6
- pydot==2.0.0
- pynndescent==0.5.12
- pyparsing==3.1.2
- pyro-api==0.1.2
- pyro-ppl==1.9.0
- pysankey2==0.1.0
- python-dateutil==2.9.0.post0
- pytorch-lightning==1.9.5
- pytz==2024.1
- pyyaml==6.0.1
- regex==2024.5.15
- requests==2.28.1
- rich==13.7.1
- safetensors==0.4.3
- scanpy==1.10.1
- scgpt==0.2.1
- scib==1.1.5
- scikit-learn==1.5.0
- scikit-misc==0.3.1
- scipy==1.13.0
- scvi-tools==0.20.3
- seaborn==0.13.2
- sentry-sdk==2.5.1
- session-info==1.0.0
- setproctitle==1.3.3
- setuptools==70.1.0
- smmap==5.0.1
- statsmodels==0.14.2
- stdlib-list==0.10.0
- sympy==1.12
- tenacity==8.5.0
- tensorstore==0.1.59
- texttable==1.7.0
- threadpoolctl==3.5.0
- tokenizers==0.19.1
- toolz==0.12.1
- torch==2.1.2+cu118
- torchaudio==2.1.2+cu118
- torchdata==0.7.1
- torchmetrics==1.4.0.post0
- torchtext==0.16.2
- torchvision==0.16.2+cu118
- tqdm==4.66.4
- traitlets==5.14.3
- transformers==4.41.2
- triton==2.1.0
- tzdata==2024.1
- umap-learn==0.5.6
- urllib3==1.26.13
- wandb==0.17.1
- wrapt==1.16.0
- xxhash==3.4.1
- yarl==1.9.4
prefix: /home/chenshengquan/anaconda3/envs/fengsicheng