From b54e27eb35efd8e6771c067099b42bc72ed407b2 Mon Sep 17 00:00:00 2001 From: bbimber Date: Sun, 13 Oct 2024 07:15:02 -0700 Subject: [PATCH] Fix typo --- R/Phenotyping.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/R/Phenotyping.R b/R/Phenotyping.R index 25e0f3c..e3d645d 100644 --- a/R/Phenotyping.R +++ b/R/Phenotyping.R @@ -132,7 +132,7 @@ PlotImmuneMarkers <- function(seuratObj, reductions = c('tsne', 'umap')) { cytokines <- c(cytokines, c('LOC114675338', 'LOC114675718', 'LOC100426853')) PlotMarkerSeries(seuratObj, reductions = reductions, features = cytokines, 'Cytokines/Receptors') - PlotMarkerSeries(seuratObj, reductions = reductions, GetGeneSet('MHC-II') = cytokines, 'MHC-II') + PlotMarkerSeries(seuratObj, reductions = reductions, features = GetGeneSet('MHC-II'), 'MHC-II') # KLRC2 = ENSMMUG00000050862 klrs <- c('KLRB1', 'KLRC1', 'KLRD1', 'KLRF1', 'KLRF2', 'KLRG1', 'KLRG2', 'KLRC2', 'KLRC3', 'KLRK1', 'ENSMMUG00000050862')