From 18863361fad46c64d1db12870a7b5dfda36eedcd Mon Sep 17 00:00:00 2001 From: bbimber Date: Sat, 2 Dec 2023 07:40:48 -0800 Subject: [PATCH] Add additional component derived from RIRA T/NK --- .../Tcell_EffectorDifferentiation.tsv | 176 ++++++++++++++++++ 1 file changed, 176 insertions(+) create mode 100644 inst/components/Tcell_EffectorDifferentiation.tsv diff --git a/inst/components/Tcell_EffectorDifferentiation.tsv b/inst/components/Tcell_EffectorDifferentiation.tsv new file mode 100644 index 0000000..08d192b --- /dev/null +++ b/inst/components/Tcell_EffectorDifferentiation.tsv @@ -0,0 +1,176 @@ +feature weight +CD7 -0.130132539885501 +CA6 -0.101734488428905 +LTB -0.101497617025973 +SELL -0.0956423952992196 +CCR7 -0.0801722404700099 +PECAM1 -0.0759562977946552 +FUOM -0.0741727032725378 +JUNB -0.0728194634880174 +LEF1 -0.0724104802613937 +GSTT1 -0.0719792480234934 +TMIGD2 -0.0716351414023857 +CTSH -0.0636809320173194 +RGS10 -0.0631501107786434 +PLAC8 -0.0613829930463867 +LOC100425937 -0.0529055629164025 +RCAN3 -0.0511219025616197 +ITGA6 -0.0488191423022429 +KLF2 -0.0487228541316268 +JUN -0.0449497362909219 +SOCS3 -0.0438974717171746 +SPOCK2 -0.0437442300949749 +NME2 -0.0431272562342748 +IL6ST -0.0423970081519909 +STAT1 -0.039134202888361 +SATB1 -0.0386347496661143 +RPIA -0.0385510156408052 +GYPC -0.0334778405829371 +ADD3 -0.0313398364556999 +BTG2 -0.03097435014285 +BTG1 -0.0308746903942566 +TRIB2 -0.0307113648947275 +LDHB -0.0305685771603686 +IL7R -0.0279949111688047 +EIF3G -0.0270189014365815 +LOC716637 -0.0219995667505869 +IKZF1 -0.0206632777829337 +LOC114672189 -0.0204563777070574 +GPRIN3 -0.0170137583242281 +SOX4 -0.0157327942290105 +MX1 -0.0156068687258288 +PLAAT4 -0.0139635982963107 +ABTB1 -0.0139165817158863 +PTGER4 -0.0133957218777339 +CTSL -0.0117890269420134 +PPP1CC -0.0115696143592337 +PABPC1 -0.0111142257637597 +USP36 -0.00960494742432808 +GPR183 -0.00546405250296623 +NR4A2 -0.004529307159015 +ICOS -0.0035001287473638 +LOC714576 -0.00191701877759369 +NDUFV2 -0.00085965987100982 +CD4 -0.000716817185046189 +CREM 0.000568602244746645 +ID3 0.00188786429555154 +ENO1 0.00367623708539127 +IFI6 0.00468269470167111 +CAPG 0.00551925058528 +LOC114673210 0.00940577262596679 +SLIRP 0.0139597439688077 +FGFR1OP2 0.0153226573075857 +ARID5B 0.0166992922025027 +PVRIG 0.0169877007193156 +ENO2 0.0172186581464775 +CXCR4 0.01749159687656 +GLRX 0.0183085285251553 +CD8B 0.0189689637598226 +EGLN3 0.0195644426523746 +SYNE2 0.0196808278083594 +TMA7 0.020707095059745 +COA1 0.0211982248064708 +BICDL1 0.0221690417023735 +ATP5F1E 0.0228262409832933 +NDUFB1 0.027172439455641 +LDHA 0.0278140575863914 +LOC100427851 0.0295001160209898 +CLDND1 0.0307769122221105 +LOC716034 0.0334968126240208 +CTSW 0.0339663053924986 +TNFAIP3 0.034956708216893 +CMC1 0.0365379420977471 +ITGB1 0.0367331637707835 +IKZF2 0.037946773782637 +RESF1 0.0384757005891124 +LOC114677140 0.0393951204042823 +ANKRD12 0.0404163304771302 +HERC1 0.0423611740896149 +SERPINA1 0.0431633490291676 +PITPNC1 0.0440357706349853 +RASGRP1 0.0452972990818462 +RHOF 0.045871139640252 +LOC694887 0.0465475254547404 +SKAP1 0.047096184243299 +SLC4A7 0.0478439479807322 +TC2N 0.0479299793521909 +SH3KBP1 0.048526415028694 +CD8A 0.0511949771724608 +ALDOA 0.0516225785657347 +PKM 0.0523672959990514 +ARAP2 0.054982102783274 +NKG7 0.181761830944504 +CCL5 0.181395019603317 +CST7 0.180859513270171 +GZMB 0.171562147431984 +GNLY 0.169816021538893 +HOPX 0.15107831094276 +CCL4L1 0.147088576854784 +GZMH 0.145942533136181 +S100A4 0.144876421887173 +S100A10 0.142923245925488 +AHNAK 0.140401445493959 +S100A11 0.132481628951025 +RGS9 0.130412265541897 +APOBEC3C 0.118926118116665 +LOC705095 0.118300369297045 +CD52 0.117724865251855 +ANXA1 0.116915021541882 +KLRD1 0.115343785747182 +TESC 0.113863332471741 +PRF1 0.113416578586866 +TNFRSF1B 0.110623948422555 +CRIP1 0.108646599858801 +RHOC 0.107334737606203 +GZMA 0.106644966398703 +LOC100426632 0.106557607665391 +SRGN 0.105709393760342 +ZEB2 0.104797202103908 +TGFBR3 0.104613257016506 +LOC100430627 0.104032993888602 +GZMM 0.101149362706307 +APOBEC3H 0.0997345705085563 +DHRS7 0.0972599887924773 +SH3BP5 0.096358644862924 +KLRB1 0.0949774769474911 +AIM2 0.0935688528619666 +LCP1 0.0933728561240893 +ITGB2 0.0931114797373758 +GZMK 0.0928793018272012 +PRSS57 0.0919701079031127 +CD44 0.0912624386616802 +KLRC2 0.0907962666127997 +LY6E-1 0.0886539141512733 +GAPDH 0.0883174107176478 +PTPN22 0.0875675086077972 +SLA2 0.0866095313965237 +CD99 0.0864124010870658 +CCDC69 0.0863980340700789 +NKG2D 0.0843095885725934 +GPR141 0.0838651702763584 +BST2 0.0836779306549234 +ZBTB38 0.0830043629908957 +FLNA 0.0825863898004231 +MAMU-DPB 0.0823519861748275 +PPP1R12A 0.078924747156577 +KLF6 0.0785504281460991 +ITGAL 0.0779645153039274 +CD74 0.0773249087557951 +CX3CR1 0.076997370388693 +EML4 0.0767287518791595 +IL2RB 0.0767021881818581 +LOC106993196 0.0725428763955511 +EZR 0.0714957356789715 +CPD 0.070582894233132 +PRKCH 0.070425968400993 +TYROBP 0.0656841068887165 +VIM 0.0656290053119115 +SEMA4D 0.0647219523986251 +LOC711031 0.0632653238369819 +ATP2B4 0.062931426881727 +SYNE1 0.0621982954821586 +S100A6 0.0617066993506945 +CLEC2D 0.0604694222998336 +ITGA4 0.059413979819789 +TPI1 0.0576982202036486 +SYTL3 0.0569023301259713