From 9a81e81642fee3f309b2fa2b94c9b5dac6c401ea Mon Sep 17 00:00:00 2001 From: 162348 Date: Sat, 19 Oct 2024 21:00:51 +0900 Subject: [PATCH] removed irrelevant dependencies --- .gitignore | 1 + Manifest.toml | 55 +-------------------------------------------------- Project.toml | 6 ------ README.md | 2 +- 4 files changed, 3 insertions(+), 61 deletions(-) diff --git a/.gitignore b/.gitignore index 95731a5..ddcefb2 100644 --- a/.gitignore +++ b/.gitignore @@ -4,3 +4,4 @@ /Manifest.toml /docs/Manifest.toml /docs/build/ +.DS_Store \ No newline at end of file diff --git a/Manifest.toml b/Manifest.toml index 497b2f0..01c0ab0 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -2,7 +2,7 @@ julia_version = "1.11.1" manifest_format = "2.0" -project_hash = "d7ad68b212073c8b4416a9ad3a1a0dc67d7fc840" +project_hash = "3a1bdc928e741ea648cfbe487012ab30411c4c0c" [[deps.AbstractFFTs]] deps = ["LinearAlgebra"] @@ -202,12 +202,6 @@ git-tree-sha1 = "ea32b83ca4fefa1768dc84e504cc0a94fb1ab8d1" uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" version = "2.4.2" -[[deps.Conda]] -deps = ["Downloads", "JSON", "VersionParsing"] -git-tree-sha1 = "b19db3927f0db4151cb86d073689f2428e524576" -uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d" -version = "1.10.2" - [[deps.ConstructionBase]] git-tree-sha1 = "76219f1ed5771adbb096743bff43fb5fdd4c1157" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" @@ -255,12 +249,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[deps.DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[deps.Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -683,12 +671,6 @@ version = "0.16.5" SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" SymEngine = "123dc426-2d89-5057-bbad-38513e3affd8" -[[deps.Lazy]] -deps = ["MacroTools"] -git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" -uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" -version = "0.15.1" - [[deps.LazyArtifacts]] deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" @@ -965,12 +947,6 @@ git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.31" -[[deps.Pandas]] -deps = ["Compat", "DataValues", "Dates", "IteratorInterfaceExtensions", "Lazy", "OrderedCollections", "Pkg", "PyCall", "Statistics", "TableTraits", "TableTraitsUtils", "Tables"] -git-tree-sha1 = "0ccb570180314e4dfa3ad81e49a3df97e1913dc2" -uuid = "eadc2687-ae89-51f9-a5d9-86b5a6373a9c" -version = "1.6.1" - [[deps.Pango_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "FriBidi_jll", "Glib_jll", "HarfBuzz_jll", "JLLWrappers", "Libdl"] git-tree-sha1 = "e127b609fb9ecba6f201ba7ab753d5a605d53801" @@ -1087,18 +1063,6 @@ git-tree-sha1 = "77a42d78b6a92df47ab37e177b2deac405e1c88f" uuid = "43287f4e-b6f4-7ad1-bb20-aadabca52c3d" version = "1.2.1" -[[deps.PyCall]] -deps = ["Conda", "Dates", "Libdl", "LinearAlgebra", "MacroTools", "Serialization", "VersionParsing"] -git-tree-sha1 = "9816a3826b0ebf49ab4926e2b18842ad8b5c8f04" -uuid = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" -version = "1.96.4" - -[[deps.PyPlot]] -deps = ["Colors", "LaTeXStrings", "PyCall", "Sockets", "Test", "VersionParsing"] -git-tree-sha1 = "0371ca706e3f295481cbf94c8c36692b072285c2" -uuid = "d330b81b-6aea-500a-939a-2ce795aea3ee" -version = "2.11.5" - [[deps.Qt6Base_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Fontconfig_jll", "Glib_jll", "JLLWrappers", "Libdl", "Libglvnd_jll", "OpenSSL_jll", "Vulkan_Loader_jll", "Xorg_libSM_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Xorg_libxcb_jll", "Xorg_xcb_util_cursor_jll", "Xorg_xcb_util_image_jll", "Xorg_xcb_util_keysyms_jll", "Xorg_xcb_util_renderutil_jll", "Xorg_xcb_util_wm_jll", "Zlib_jll", "libinput_jll", "xkbcommon_jll"] git-tree-sha1 = "492601870742dcd38f233b23c3ec629628c1d724" @@ -1212,12 +1176,6 @@ git-tree-sha1 = "3bac05bc7e74a75fd9cba4295cde4045d9fe2386" uuid = "6c6a2e73-6563-6170-7368-637461726353" version = "1.2.1" -[[deps.Seaborn]] -deps = ["Pandas", "PyCall", "PyPlot", "Reexport", "Test"] -git-tree-sha1 = "c7d0011bfb487a40501ad9383e24f1908809e1ed" -uuid = "d2ef9438-c967-53ab-8060-373fdd9e13eb" -version = "1.1.1" - [[deps.SentinelArrays]] deps = ["Dates", "Random"] git-tree-sha1 = "ff11acffdb082493657550959d4feb4b6149e73a" @@ -1394,12 +1352,6 @@ git-tree-sha1 = "c06b2f539df1c6efa794486abfb6ed2022561a39" uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.1" -[[deps.TableTraitsUtils]] -deps = ["DataValues", "IteratorInterfaceExtensions", "Missings", "TableTraits"] -git-tree-sha1 = "78fecfe140d7abb480b53a44f3f85b6aa373c293" -uuid = "382cd787-c1b6-5bf2-a167-d5b971a19bda" -version = "1.0.2" - [[deps.Tables]] deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "OrderedCollections", "TableTraits"] git-tree-sha1 = "598cd7c1f68d1e205689b1c2fe65a9f85846f297" @@ -1477,11 +1429,6 @@ git-tree-sha1 = "ca0969166a028236229f63514992fc073799bb78" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" version = "0.2.0" -[[deps.VersionParsing]] -git-tree-sha1 = "58d6e80b4ee071f5efd07fda82cb9fbe17200868" -uuid = "81def892-9a0e-5fdd-b105-ffc91e053289" -version = "1.3.0" - [[deps.Vulkan_Loader_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Wayland_jll", "Xorg_libX11_jll", "Xorg_libXrandr_jll", "xkbcommon_jll"] git-tree-sha1 = "2f0486047a07670caad3a81a075d2e518acc5c59" diff --git a/Project.toml b/Project.toml index a32861d..dc1b588 100644 --- a/Project.toml +++ b/Project.toml @@ -11,11 +11,8 @@ LaTeXStrings = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" Optim = "429524aa-4258-5aef-a3af-852621145aeb" Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" ProgressBars = "49802e3a-d2f1-5c88-81d8-b72133a6f568" -PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" -PyPlot = "d330b81b-6aea-500a-939a-2ce795aea3ee" Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" RecipesBase = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -Seaborn = "d2ef9438-c967-53ab-8060-373fdd9e13eb" StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" @@ -28,11 +25,8 @@ LaTeXStrings = "1.4.0" Optim = "1.9.4" Plots = "1.40.8" ProgressBars = "1.5.1" -PyCall = "1.96.4" -PyPlot = "2.11.5" Random = "1.11.0" RecipesBase = "1.3.4" -Seaborn = "1.1.1" StatsBase = "0.34.3" StatsPlots = "0.15.7" Zygote = "0.6.72" diff --git a/README.md b/README.md index e4bc3d2..c8ae49f 100644 --- a/README.md +++ b/README.md @@ -5,7 +5,7 @@ [![Build Status](https://github.com/162348/PDMPFlux.jl/actions/workflows/CI.yml/badge.svg?branch=main)](https://github.com/162348/PDMPFlux.jl/actions/workflows/CI.yml?query=branch%3Amain) [![Coverage](https://codecov.io/gh/162348/PDMPFlux.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/162348/PDMPFlux.jl) -This repository contains a `Zygote.jl` implementation of the PDMP samplers. +This repository contains a [`Zygote.jl`](https://github.com/FluxML/Zygote.jl) implementation of the PDMP samplers. ## Examples